Gene Slin_4670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4670 
Symbol 
ID8728434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5688567 
End bp5689523 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content55% 
IMG OID 
ProductNMT1/THI5 like domain protein 
Protein accessionYP_003389447 
Protein GI284039517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC ATATCCGTTT AGCCCTCGAT CGGACGCCAA ACACCAACCA CACAGGATTT 
TATGTTGCCC TGGCCAAAGG AGCGTATGCT CAGGCTGGTC TTGATGTCGA ACTCATCTCA
CCAGATCAGG ACGACTATCG CACAATGCCC GCCCGGCGCG TTTCGCAGGG CACCGCCGAA
CTGGCCATTA CACCCTCGGA GAGTGTAATC AGCTACCAAA CCAACGGAGT TCCCCTAATC
GCCGTAGCCG CTGTTCTGGC CCGCGACATC AGTGCGATCG TTACCCTGAA AGAGAGCGGT
ATCAGTCGGC CCCGCGAACT GGATGGTAAA GTATACGGCT CGTATGGAGC CCGCTATGAA
GACGATATGA TTCGTCAGCT TATTCAGAAC GACGACGGCC GTGGTCAGTT TATATCGCAT
AAAATGGGCT GGGCGGGTAT CTGGCGGGCC TTGCTCACCC GCGAAGTGGA TGCTGCCTGG
TGCTGGCTGA CCTGGGAGGG CGTGCAGGCC GATATTCAGG GCGTTGATCT GAACCAGTTT
TTGTTCGACG AATACGAAAT CCCCTACGGA TACAATCCTG TTCTGACGGC CCATAGCCAG
TGGACGGCTC AAAACAGTGA TGCCCTGTGC CGGTTTCTGG AAGCAACAGC CGCCGGGTAC
CGGTTCGCCA TTAAAAATCC GGACGAAGCT GTTCGCCTGT TAATGAAAAC GGCCAATCAC
CCGACGCTTA CCAAACGCAA TTTTCTGGAA CAGAGTCAGC AAATGGTGTC GGGCTATTAT
CTGGACGGCG AAGGGCACTG GGGCTTCATG CACCGAAACG TCTGGGTATC GTTTACGAAC
TGGATGATCC GCAACCACCT GCTCACCGAC AAAGACGGCG AACTAATTCA ACGCATGGAC
GTCGATACGC TCTTCACTAA TAAATTCCTG GAAGGCGTTC CCGCCATGAT GCGGTAG
 
Protein sequence
MSTHIRLALD RTPNTNHTGF YVALAKGAYA QAGLDVELIS PDQDDYRTMP ARRVSQGTAE 
LAITPSESVI SYQTNGVPLI AVAAVLARDI SAIVTLKESG ISRPRELDGK VYGSYGARYE
DDMIRQLIQN DDGRGQFISH KMGWAGIWRA LLTREVDAAW CWLTWEGVQA DIQGVDLNQF
LFDEYEIPYG YNPVLTAHSQ WTAQNSDALC RFLEATAAGY RFAIKNPDEA VRLLMKTANH
PTLTKRNFLE QSQQMVSGYY LDGEGHWGFM HRNVWVSFTN WMIRNHLLTD KDGELIQRMD
VDTLFTNKFL EGVPAMMR