Gene Slin_4669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4669 
Symbol 
ID8728433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5687329 
End bp5688474 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content47% 
IMG OID 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003389446 
Protein GI284039516 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTA GCTATTTCAC GCCCATTGTC CTGTTCACTG TTATTTCGTT AGCTTCCTGT 
CAAAGTCGCT CAGGTGAGCA GGATTATGTA GTTGAAGGCG ACCTTAAAAA CGCGTACCCT
TTTCTGGAGG GGAAAATGAT TTATCTGGGC AATACGGCCA CCCGTGATTT AGAGGATTCG
GCCAGGGTCA CCAACGGAAA GTTTAGACTT GCTTTGGCTG ACCAGTCCAC GAAATATCCC
CTTCAGGTGG CTCTGGTGTA CAAGCCCAGC GAGCCCAATC AACCCTATGC GACAATAGGC
TACTCAAATC CGTTCAAAAA GAATACTACC GAAGATAATT TCTACCTAGA GCCGGGTGTT
ACTCAACTGG AGCCAGACAC AACGGCGCAT GCCAGACAAT TAATCGCCCG TTTGGCCAGA
CTTAACAAAC GGTCGATTTT AACGCGGTTT GTCGAGGTGA AGCCCCAGAC CAGGGTTGCG
TTTATGCATT TATCCTTCCT ACCCAACGAA ACGCAGCAAC CGGACAAACA GAAACATAAC
GAAAGCCAAG TCAGGAAATA CCCTTCTTCT ATCTATTTGT TGGGCGAATT ATATCGTAAC
CGAACCTCCC TGAGCGAAGC CGAGATTAGC CGATTACTTA GCCTCTTTGA TCCATCTTTA
AACGAAATCG ATGTATACAA AACCCTGGTC GCTTACACCA CAAATCCAGC TCCGACCGGC
GATGATTTTC CTGCTTCCGT TTCCTTGATG AAGCCGGACC ATAGTTTTAC CTCATCGGTG
CTGTCGTCTG ACAAACATAC ACTGGTGGTA TTCTGGGCCA GCTGGTGTGG CCCCTGCCGC
CAGGAGATTC CTCAGCTTAA GGCGCTATAC ACAAAACATA AAGACAAGCT AAACATTGTC
AGTATTTCAA CCGATCAGCA GGAAGAGCGT TGGCAAAAGG CCATGCAAAA AGAACAAATG
CCTTGGCCGC AATTAGTTGC GGACAACCCA AGTTCATTTG TGCAACTGGA TAAAAAGTAC
GACTTAAAAC TAATTCCCGT TTGCCTACTC TTTGGCCCCG ATCACAAGCT GGTGAAACGT
TACGAAGGAA GGGGAGAAGG TGAAAATAGC GTTGACTATC AGGTTAGTAA TCTACTTAAC
CAGTGA
 
Protein sequence
MKLSYFTPIV LFTVISLASC QSRSGEQDYV VEGDLKNAYP FLEGKMIYLG NTATRDLEDS 
ARVTNGKFRL ALADQSTKYP LQVALVYKPS EPNQPYATIG YSNPFKKNTT EDNFYLEPGV
TQLEPDTTAH ARQLIARLAR LNKRSILTRF VEVKPQTRVA FMHLSFLPNE TQQPDKQKHN
ESQVRKYPSS IYLLGELYRN RTSLSEAEIS RLLSLFDPSL NEIDVYKTLV AYTTNPAPTG
DDFPASVSLM KPDHSFTSSV LSSDKHTLVV FWASWCGPCR QEIPQLKALY TKHKDKLNIV
SISTDQQEER WQKAMQKEQM PWPQLVADNP SSFVQLDKKY DLKLIPVCLL FGPDHKLVKR
YEGRGEGENS VDYQVSNLLN Q