Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4669 |
Symbol | |
ID | 8728433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5687329 |
End bp | 5688474 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_003389446 |
Protein GI | 284039516 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTTA GCTATTTCAC GCCCATTGTC CTGTTCACTG TTATTTCGTT AGCTTCCTGT CAAAGTCGCT CAGGTGAGCA GGATTATGTA GTTGAAGGCG ACCTTAAAAA CGCGTACCCT TTTCTGGAGG GGAAAATGAT TTATCTGGGC AATACGGCCA CCCGTGATTT AGAGGATTCG GCCAGGGTCA CCAACGGAAA GTTTAGACTT GCTTTGGCTG ACCAGTCCAC GAAATATCCC CTTCAGGTGG CTCTGGTGTA CAAGCCCAGC GAGCCCAATC AACCCTATGC GACAATAGGC TACTCAAATC CGTTCAAAAA GAATACTACC GAAGATAATT TCTACCTAGA GCCGGGTGTT ACTCAACTGG AGCCAGACAC AACGGCGCAT GCCAGACAAT TAATCGCCCG TTTGGCCAGA CTTAACAAAC GGTCGATTTT AACGCGGTTT GTCGAGGTGA AGCCCCAGAC CAGGGTTGCG TTTATGCATT TATCCTTCCT ACCCAACGAA ACGCAGCAAC CGGACAAACA GAAACATAAC GAAAGCCAAG TCAGGAAATA CCCTTCTTCT ATCTATTTGT TGGGCGAATT ATATCGTAAC CGAACCTCCC TGAGCGAAGC CGAGATTAGC CGATTACTTA GCCTCTTTGA TCCATCTTTA AACGAAATCG ATGTATACAA AACCCTGGTC GCTTACACCA CAAATCCAGC TCCGACCGGC GATGATTTTC CTGCTTCCGT TTCCTTGATG AAGCCGGACC ATAGTTTTAC CTCATCGGTG CTGTCGTCTG ACAAACATAC ACTGGTGGTA TTCTGGGCCA GCTGGTGTGG CCCCTGCCGC CAGGAGATTC CTCAGCTTAA GGCGCTATAC ACAAAACATA AAGACAAGCT AAACATTGTC AGTATTTCAA CCGATCAGCA GGAAGAGCGT TGGCAAAAGG CCATGCAAAA AGAACAAATG CCTTGGCCGC AATTAGTTGC GGACAACCCA AGTTCATTTG TGCAACTGGA TAAAAAGTAC GACTTAAAAC TAATTCCCGT TTGCCTACTC TTTGGCCCCG ATCACAAGCT GGTGAAACGT TACGAAGGAA GGGGAGAAGG TGAAAATAGC GTTGACTATC AGGTTAGTAA TCTACTTAAC CAGTGA
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Protein sequence | MKLSYFTPIV LFTVISLASC QSRSGEQDYV VEGDLKNAYP FLEGKMIYLG NTATRDLEDS ARVTNGKFRL ALADQSTKYP LQVALVYKPS EPNQPYATIG YSNPFKKNTT EDNFYLEPGV TQLEPDTTAH ARQLIARLAR LNKRSILTRF VEVKPQTRVA FMHLSFLPNE TQQPDKQKHN ESQVRKYPSS IYLLGELYRN RTSLSEAEIS RLLSLFDPSL NEIDVYKTLV AYTTNPAPTG DDFPASVSLM KPDHSFTSSV LSSDKHTLVV FWASWCGPCR QEIPQLKALY TKHKDKLNIV SISTDQQEER WQKAMQKEQM PWPQLVADNP SSFVQLDKKY DLKLIPVCLL FGPDHKLVKR YEGRGEGENS VDYQVSNLLN Q
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