Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4666 |
Symbol | |
ID | 8728430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5683834 |
End bp | 5684949 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389443 |
Protein GI | 284039513 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.509697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCGA TTTATACAAT CGTTCTGGCT TTTGCTTATA TAGTATTTTT TAATGTAACG GCATCGGCGC AGGGTTGTGT GGCCGTTCGG CACATGAGCT GTGCGGCTCC GGCGGGCTCT GCCGATTATT TCAAACAACG CAACGGACAC TGGCAGGTGT CGGCAGGGTA CCGTTTCTTT CGCTCGTACA AGCACTTTGT GGGCGATGAA GAACAGAAAC AGCGCGTTGA ACAGGGGACC AACGTCGTCA ACGTATCGCA CGCACTCGAT TTAGGGCTTA CCTATCTGGT TAATCAGCGA CTTTCGTTCT CGGTCAATTT ACCGGTTCAA TACAACGACC GCTCATCGCT TTATGAGCAT TACGGCAACG CTATTGCCCA AAACCCCCAG CAAAAGCGCT TTCATACCGG CTCACAGGGT ATTGGCGATC TGCGCATTTC GGGGAGCTAC TGGCTGGTGA ATCCCGCCAA ACTGCCCAAA GCCAATCTGG CGGCAGGCCT GGGGGTAAAA CTGCCAACGG GCAATTACGC AGCCACAGAC AACTTTCATA AACTGACCAA AGAAGGGGTT GATTACACCA TCAATCAGCC AGTTGATCAG TCGATTCAAC TGGGCGATGG AGGTGTTGGC GTTAGTGTTG AACTTCAGGG ATATGCTTCC ATCACGAAAA CCCTGACGGC CTATGCCAAC GGGTTTTATC TGTTCAATCC GCGCGAAACC AACGGGGTTG TGCGCAACCC AACGGCCACG ACCATCGATC TCGTAACCGG TACCTTCTCC GTTGCCGATC AGTTTGCCGC CCGGGTCGGG TTGAGCCAGT CGATCAAGGC TATTCCGGGA CTGGCGGTTA TGCTGGGTGG CCGGGTGGAA GGCGTTCCGG CTATCGATGC CTTTGGTGGT AGCAGCGGCT TCCGTCGTCC GGGGTATATC GTATCGGTAG AGCCGGGCCT TTCCTACATG CGCCACAAAA CATCCATTGC CGCTACGGTG CCGGTGGCTG TGTATCGTAA CCGCATTAAA AGCTATGCCG ACCGGCTCGA TCCGCTGGGC CTCAAGCACG GTGATGCAGC CTTCGCCGAT TATCTGGTAT CGATCAACGT ATCCCGCTGG TTTTAA
|
Protein sequence | MKSIYTIVLA FAYIVFFNVT ASAQGCVAVR HMSCAAPAGS ADYFKQRNGH WQVSAGYRFF RSYKHFVGDE EQKQRVEQGT NVVNVSHALD LGLTYLVNQR LSFSVNLPVQ YNDRSSLYEH YGNAIAQNPQ QKRFHTGSQG IGDLRISGSY WLVNPAKLPK ANLAAGLGVK LPTGNYAATD NFHKLTKEGV DYTINQPVDQ SIQLGDGGVG VSVELQGYAS ITKTLTAYAN GFYLFNPRET NGVVRNPTAT TIDLVTGTFS VADQFAARVG LSQSIKAIPG LAVMLGGRVE GVPAIDAFGG SSGFRRPGYI VSVEPGLSYM RHKTSIAATV PVAVYRNRIK SYADRLDPLG LKHGDAAFAD YLVSINVSRW F
|
| |