Gene Slin_4666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4666 
Symbol 
ID8728430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5683834 
End bp5684949 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389443 
Protein GI284039513 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.509697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGA TTTATACAAT CGTTCTGGCT TTTGCTTATA TAGTATTTTT TAATGTAACG 
GCATCGGCGC AGGGTTGTGT GGCCGTTCGG CACATGAGCT GTGCGGCTCC GGCGGGCTCT
GCCGATTATT TCAAACAACG CAACGGACAC TGGCAGGTGT CGGCAGGGTA CCGTTTCTTT
CGCTCGTACA AGCACTTTGT GGGCGATGAA GAACAGAAAC AGCGCGTTGA ACAGGGGACC
AACGTCGTCA ACGTATCGCA CGCACTCGAT TTAGGGCTTA CCTATCTGGT TAATCAGCGA
CTTTCGTTCT CGGTCAATTT ACCGGTTCAA TACAACGACC GCTCATCGCT TTATGAGCAT
TACGGCAACG CTATTGCCCA AAACCCCCAG CAAAAGCGCT TTCATACCGG CTCACAGGGT
ATTGGCGATC TGCGCATTTC GGGGAGCTAC TGGCTGGTGA ATCCCGCCAA ACTGCCCAAA
GCCAATCTGG CGGCAGGCCT GGGGGTAAAA CTGCCAACGG GCAATTACGC AGCCACAGAC
AACTTTCATA AACTGACCAA AGAAGGGGTT GATTACACCA TCAATCAGCC AGTTGATCAG
TCGATTCAAC TGGGCGATGG AGGTGTTGGC GTTAGTGTTG AACTTCAGGG ATATGCTTCC
ATCACGAAAA CCCTGACGGC CTATGCCAAC GGGTTTTATC TGTTCAATCC GCGCGAAACC
AACGGGGTTG TGCGCAACCC AACGGCCACG ACCATCGATC TCGTAACCGG TACCTTCTCC
GTTGCCGATC AGTTTGCCGC CCGGGTCGGG TTGAGCCAGT CGATCAAGGC TATTCCGGGA
CTGGCGGTTA TGCTGGGTGG CCGGGTGGAA GGCGTTCCGG CTATCGATGC CTTTGGTGGT
AGCAGCGGCT TCCGTCGTCC GGGGTATATC GTATCGGTAG AGCCGGGCCT TTCCTACATG
CGCCACAAAA CATCCATTGC CGCTACGGTG CCGGTGGCTG TGTATCGTAA CCGCATTAAA
AGCTATGCCG ACCGGCTCGA TCCGCTGGGC CTCAAGCACG GTGATGCAGC CTTCGCCGAT
TATCTGGTAT CGATCAACGT ATCCCGCTGG TTTTAA
 
Protein sequence
MKSIYTIVLA FAYIVFFNVT ASAQGCVAVR HMSCAAPAGS ADYFKQRNGH WQVSAGYRFF 
RSYKHFVGDE EQKQRVEQGT NVVNVSHALD LGLTYLVNQR LSFSVNLPVQ YNDRSSLYEH
YGNAIAQNPQ QKRFHTGSQG IGDLRISGSY WLVNPAKLPK ANLAAGLGVK LPTGNYAATD
NFHKLTKEGV DYTINQPVDQ SIQLGDGGVG VSVELQGYAS ITKTLTAYAN GFYLFNPRET
NGVVRNPTAT TIDLVTGTFS VADQFAARVG LSQSIKAIPG LAVMLGGRVE GVPAIDAFGG
SSGFRRPGYI VSVEPGLSYM RHKTSIAATV PVAVYRNRIK SYADRLDPLG LKHGDAAFAD
YLVSINVSRW F