| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4588 |
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| Symbol | |
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| ID | 8728352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5561068 |
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| End bp | 5562315 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003389366 |
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| Protein GI | 284039436 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00044707 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCG TACTACCTAA ACGATTTTGG ACAACTCAGC GCCTGGCTCT TTTTGGGGGC
GGGACACTGG TAATTGGCTT ACTGGCTTAC ACCCTTTTCT TCGCCGACCG TCGGTCGAAG
CTGAATGTGG AAAAAGACAA AATAACGGTC TCAACCGTCT CAACAGGGCC TTTTGAAGAT
TTTATCGCCG TAACGGGCGT AGTTCAACCG CTGAAAACCA TCCGGCTCGA TGCCATTGAA
GGTGGGTATG TCACCCAGAA ACTGGTTGAA GGCGGCAGCA CGGTAAAACA GGGCGATGTA
CTCCTGAAAC TGGAAAACCA AAGCCTGAAA CTGAGCTTCC TGCAATCCGA AACCGAAGCC
AACCGACTGG TCAACGACTT ACAAAATACT CGCCAACGAT TACAAGTTGA GCGGTTTACG
CTCCGAAAAA CGCTGGCCGA TCTGGATGCG CAAATCGATC AGGCCAAAGA CTCCTACGAC
CGGCAAGCCA AATTGTATAA AGACAAAGTC GTTTCGGAAG AGGATTACCT GAAAGCCAAA
CGGGCCTACG AACGGCTGGC TGGCCAGCGG ACCATTGAGA TCGAAACGCA GAAGTACCAG
GAAGATAACG CCAAGTTCCA GATCAAACAA TTGGAAGGCA CCTTGCAACG TACGCAGAAA
AATGTGGCTC TTTGGCAGCA GACGCTGGAT AATCTAGTGG TGAAAGCGCC CGTTTCGGGG
CAGTTGTCCA GCATCGATGT AGAAGTTGGC TCGAATATCA ACCGGGGGCA GAACATCGGA
CAGATTGATG ACCTGAATGG TTTCAAAATG CGCGTAGGGG TCGATGAGCA TTACATCAGC
CGGGTATTCG CTGGTCTGAA AGGCTCATTT GAGTTCAACG GAAAAATGCA TGAACTTACC
ATTAACCGGG TGTATCCGGA AGTAAAAAGC GGCCGTTTTG AGGTCGACAT GATTTTCCCG
AAAGGGGCAC CCGAAGGCAT CAAGCGCGGT CAGTCGTCGC CCATACAGCT GGAGTTGGGC
AAAGCGGCTA AAGCAACGCT CATTCCCGTC GGCGGCTTCT TCTCCGATAC GGGCGGCAAC
TGGGTGTATG TGGTTGACAA GTCGGGCAAG CGGGCGGTAA AACGCCAGAT TACGCTGGGC
CGCAAAAACC CTGAGTTCTA CGAAGTGCTG GACGGCCTCC AGCCCGGCGA ACAGGTGATA
ACCAGCAGTT ACGAGAATTT TGGTGATAAC GAAGTATTAG AGTTTTAA
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| Protein sequence | MDRVLPKRFW TTQRLALFGG GTLVIGLLAY TLFFADRRSK LNVEKDKITV STVSTGPFED
FIAVTGVVQP LKTIRLDAIE GGYVTQKLVE GGSTVKQGDV LLKLENQSLK LSFLQSETEA
NRLVNDLQNT RQRLQVERFT LRKTLADLDA QIDQAKDSYD RQAKLYKDKV VSEEDYLKAK
RAYERLAGQR TIEIETQKYQ EDNAKFQIKQ LEGTLQRTQK NVALWQQTLD NLVVKAPVSG
QLSSIDVEVG SNINRGQNIG QIDDLNGFKM RVGVDEHYIS RVFAGLKGSF EFNGKMHELT
INRVYPEVKS GRFEVDMIFP KGAPEGIKRG QSSPIQLELG KAAKATLIPV GGFFSDTGGN
WVYVVDKSGK RAVKRQITLG RKNPEFYEVL DGLQPGEQVI TSSYENFGDN EVLEF
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