Gene Slin_4584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4584 
Symbol 
ID8728348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand+ 
Start bp5556202 
End bp5556942 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content52% 
IMG OID 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_003389362 
Protein GI284039432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.221225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TTTTAGATTA CGTATTGAGC TGCGTTTACC TCCTCTATTT TGGACTGGTC 
TTGTGTATAT TTCATCTTGC CCAGGCCACT GCGTTTAACC TGTTTGGCCG TCCGGCGCAT 
AAAAAAACGG TCGATTGGAT GAATGCCTTT ATTGCTTACG GCTGGTACTT AACCGGAAGC 
ACCATCGCCT ATCGACCATT AACTAACCTC CCCACCGACC GCCCCATTAT TTTCGTTGCC 
AACCACCAGA GTATGTTCGA CATTTCGCCC ATCATCTGGT TTCTGCGTCG GCATACGCCC 
ACGTTTGTTT CCAAGATCGA ACTGGCGCAC GGCATTCCCG GCGTTTCGTA CAACCTCCGC 
AAAAGTGGCG CGGCTCTCAT CGACCGAAAA GACCCTAAAC AGGCCATTGT GGAAATTGCC 
CGACTGGGTA AGCTCATTCA GCAGCAAAAC ATTTCTGCCG TGATTTATCC GGAGGGGACA 
CGGTCTGCAT CGGGGCAAAT GCGCCCGTTT GTAACGGGTG GGGTGGCGAC TTTACTTAAA 
CGGGCTCCAT CAGCACTGGT GGTGCCCATT ACCATTCGGG GAACGGGTCA CTTTAACCCG 
AAAGGTCTGT TTCCACTCCG GTCCTTTTCA AAAATGTCGT GGACTGTATT GCCCGGCATC 
GAACCCACTG GCCGTACACC CGACGAGGTG GTAAAGCTAG CGCAGGAAGC GATTGCCGAG 
GAGTTGAGCA AGGCTATTTA A
 
Protein sequence
MKKVLDYVLS CVYLLYFGLV LCIFHLAQAT AFNLFGRPAH KKTVDWMNAF IAYGWYLTGS 
TIAYRPLTNL PTDRPIIFVA NHQSMFDISP IIWFLRRHTP TFVSKIELAH GIPGVSYNLR 
KSGAALIDRK DPKQAIVEIA RLGKLIQQQN ISAVIYPEGT RSASGQMRPF VTGGVATLLK 
RAPSALVVPI TIRGTGHFNP KGLFPLRSFS KMSWTVLPGI EPTGRTPDEV VKLAQEAIAE 
ELSKAI