Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4566 |
Symbol | |
ID | 8728330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5538323 |
End bp | 5539405 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | transcriptional regulator protein-like protein |
Protein accession | YP_003389344 |
Protein GI | 284039414 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.439608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTATAA CCCGCTCCGC TTTCCAACGC TACCGGCTCA TTGATGAGAT CATCAGCCGA TACCCCCGCC GGTATTCCAA ACAACGGCTG TTTGAAGTCT GTCAGGATAA GTGCGGCATT CGGTCCATTT CGTCGCTCGA AAAAGATATT CAGCGGATGC GCGAAGACCA CGACGCGCCC ATTGAATACG ACAAACGGGC CAACGGCTAT TACTACAGCA ATCCGCAGTT TCGGTTGCTG AATCTGATGC TGGCTCCTGA GGACATGGAA GCACTCGACT ACGCCCGTGA GGTGCTGGCC GCTACGCAGG GGGCTACTGT TGCCGATGAA CTGACGAACG CGCTTCAGAA AGTGCGGCAG AGTCTGGATA TTATCCACGA GGTACGCAGC GACGACCGGG GCGGGCCTGC GGCATCGCGC CGGATTGTGT ATGTCGAAGA GAAAATTCTT GGCGGCAATC GTCAGTTTGT GCCGATCCTG ATTCGGGCGG TAAACCAGAG TCGACAGGTG GCATTTCGGT ACCTAAAGTA TGAGGATGTG GTGCAGGCAA CGAATAAAAA AACAATCCGT AAAGCTAAAA TAACCAGCGC ATCGGTCATT CCGGCCGAGC GGCCCAAGCT GCGTATCCTT CACCCGATTC TGTTGCGTGA AGTGGCCGAC AGCTGGTATG TAATTGGCTA CGATGCCGTG AGTGGCCGCG AGAAAACCTT TGCCCTCGAC CGCATGAGCG AACTCGAACT TCTGGACGAT CCCTGTGATG TACCCCCGAC TATTCTCGCC AACGTAAGTG AATTGTTCGA ACATATTTAC GGCATCACCG ACAGCCACGG TCCGGTGGAG GATATTGTCC TGTCCTTTTC CCCTTTGTTC GGTCAGTATG TGAAGGCCAA GCCTATTCAC CAGACGCAGG AAGTCTTAAG CGATACCGAA ACCGAGTGCG TTGTGCGGCT GCGTCTTGCT CCTAACCGCG ATCTGCTCAT GCACCTTCGC AGCTATGGCG AACACCTCAC GGTGCTGGAA CCCGCCAGTC TGGTACAGGA AATAAAGGCA TCGCTGGAAG CAACGCTGGC CCGCTATATG TAG
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Protein sequence | MPITRSAFQR YRLIDEIISR YPRRYSKQRL FEVCQDKCGI RSISSLEKDI QRMREDHDAP IEYDKRANGY YYSNPQFRLL NLMLAPEDME ALDYAREVLA ATQGATVADE LTNALQKVRQ SLDIIHEVRS DDRGGPAASR RIVYVEEKIL GGNRQFVPIL IRAVNQSRQV AFRYLKYEDV VQATNKKTIR KAKITSASVI PAERPKLRIL HPILLREVAD SWYVIGYDAV SGREKTFALD RMSELELLDD PCDVPPTILA NVSELFEHIY GITDSHGPVE DIVLSFSPLF GQYVKAKPIH QTQEVLSDTE TECVVRLRLA PNRDLLMHLR SYGEHLTVLE PASLVQEIKA SLEATLARYM
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