Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4565 |
Symbol | |
ID | 8728329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5536912 |
End bp | 5538183 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | amidohydrolase |
Protein accession | YP_003389343 |
Protein GI | 284039413 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.244661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAACC TCTACCGGCT CCTGTTTCTT GTATTTTTTT ACTTTCTGAT CAGCTCTATC GCAGCGAGTG CCCAAACGAC CACCCTCCGC TTTGCCAAAC TCATAACGGG GCAGGGCGAT GTCATTACCG ATGCGGTCGT TGTGGTGGAA GGCGACAAAA TCAGTAAGGT CGCTTCCGGC GAAAAGAACA TTCCGGCCAA TACCACTCTC ATCGACTTGC GCCCGATGGT GGCCATTCCC GGCCTGATTG ACGTGCATAC GCACATTACC TATTACTGGG ATAAAACCTC GGGCCTCAGT CCGTGGAACA GCCGCATGGA CCCGCCCACA ACGGTTTTTC TGGCGCAGGA AAACGCGCTC AAAACCCTGG AAACCGGCGT GACGACGATC CGGGATCTGG GCTCGTCGGG TGGGATGGAC ATGGCCATGC GCGACCTGAT CAACCGGGGA GCCATGAAAG GCCCCCGTAT GTTTGTGGCG GGAAATGGAC TGCATATCTC CCGGGCCAGA GTGACGCCCG GCGTTTCGAC CGTCGACCCC GGTCGCGCAG ATGGTGTCGA TGAGGTGATC AAAGTCGTGC GTCAGGAACT GGGTGCGGGT GTCGACTGGA TAAAAATCTA CGGCTCTACG GGAAGTGCCC AGAACGTGAC GGGCTTTCAG ACATTCACGC AGGACGAAAT GAAAGCGGCC GTCGATATTG CCCGACAGGC GGGAAAACGG GTCGCGATTC ACTCCTACGG GCCCGACGGC TGCAAGGCGG CTGTGCTGGC AGGGGCCGCA TCGGTGGAGC ACGCGACTGA TGTGGAACCG GAAACCTTTG CCGAGATGGT GAAACGGGGT ACGTTTTACG TGCCAACCGT CGACCATAAT CGCTACTATG CCGACCATCG GGAAGAGTAC GGCTACAACG CCATCATCGT AAAAGCATTG AACAATTACA CCGAACGAAA CTTCAAAAGT CTGCAACTGG CCGTGAAGAT GAAGGTGAAA ATAGCGATGG GCTCCGATGC CGTTTTTACC GGATTTGGTG AGAACACGCG GGAGTTGCGT TGGTTCGTCA AAGCTGGCAT GACACCCGCT CAGGCGTTGC AGACAGCTAC CGTCAATGCT GCCGAACTGC TGGATAGAAA GAACGAGCTG GGTGCCATTG CACCGGGTTT CTTTGCTGAT ATTGTCGCCG TTGATGGCGA TCCATTGTCC GACATCAATG TGGTTATTGA CAACGTCCGC TGGGTTATGA AGGGCGGCAA ACCCGTAGTC GATAAGCGAT GA
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Protein sequence | MNNLYRLLFL VFFYFLISSI AASAQTTTLR FAKLITGQGD VITDAVVVVE GDKISKVASG EKNIPANTTL IDLRPMVAIP GLIDVHTHIT YYWDKTSGLS PWNSRMDPPT TVFLAQENAL KTLETGVTTI RDLGSSGGMD MAMRDLINRG AMKGPRMFVA GNGLHISRAR VTPGVSTVDP GRADGVDEVI KVVRQELGAG VDWIKIYGST GSAQNVTGFQ TFTQDEMKAA VDIARQAGKR VAIHSYGPDG CKAAVLAGAA SVEHATDVEP ETFAEMVKRG TFYVPTVDHN RYYADHREEY GYNAIIVKAL NNYTERNFKS LQLAVKMKVK IAMGSDAVFT GFGENTRELR WFVKAGMTPA QALQTATVNA AELLDRKNEL GAIAPGFFAD IVAVDGDPLS DINVVIDNVR WVMKGGKPVV DKR
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