Gene Slin_4565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4565 
Symbol 
ID8728329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5536912 
End bp5538183 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content56% 
IMG OID 
Productamidohydrolase 
Protein accessionYP_003389343 
Protein GI284039413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.244661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACC TCTACCGGCT CCTGTTTCTT GTATTTTTTT ACTTTCTGAT CAGCTCTATC 
GCAGCGAGTG CCCAAACGAC CACCCTCCGC TTTGCCAAAC TCATAACGGG GCAGGGCGAT
GTCATTACCG ATGCGGTCGT TGTGGTGGAA GGCGACAAAA TCAGTAAGGT CGCTTCCGGC
GAAAAGAACA TTCCGGCCAA TACCACTCTC ATCGACTTGC GCCCGATGGT GGCCATTCCC
GGCCTGATTG ACGTGCATAC GCACATTACC TATTACTGGG ATAAAACCTC GGGCCTCAGT
CCGTGGAACA GCCGCATGGA CCCGCCCACA ACGGTTTTTC TGGCGCAGGA AAACGCGCTC
AAAACCCTGG AAACCGGCGT GACGACGATC CGGGATCTGG GCTCGTCGGG TGGGATGGAC
ATGGCCATGC GCGACCTGAT CAACCGGGGA GCCATGAAAG GCCCCCGTAT GTTTGTGGCG
GGAAATGGAC TGCATATCTC CCGGGCCAGA GTGACGCCCG GCGTTTCGAC CGTCGACCCC
GGTCGCGCAG ATGGTGTCGA TGAGGTGATC AAAGTCGTGC GTCAGGAACT GGGTGCGGGT
GTCGACTGGA TAAAAATCTA CGGCTCTACG GGAAGTGCCC AGAACGTGAC GGGCTTTCAG
ACATTCACGC AGGACGAAAT GAAAGCGGCC GTCGATATTG CCCGACAGGC GGGAAAACGG
GTCGCGATTC ACTCCTACGG GCCCGACGGC TGCAAGGCGG CTGTGCTGGC AGGGGCCGCA
TCGGTGGAGC ACGCGACTGA TGTGGAACCG GAAACCTTTG CCGAGATGGT GAAACGGGGT
ACGTTTTACG TGCCAACCGT CGACCATAAT CGCTACTATG CCGACCATCG GGAAGAGTAC
GGCTACAACG CCATCATCGT AAAAGCATTG AACAATTACA CCGAACGAAA CTTCAAAAGT
CTGCAACTGG CCGTGAAGAT GAAGGTGAAA ATAGCGATGG GCTCCGATGC CGTTTTTACC
GGATTTGGTG AGAACACGCG GGAGTTGCGT TGGTTCGTCA AAGCTGGCAT GACACCCGCT
CAGGCGTTGC AGACAGCTAC CGTCAATGCT GCCGAACTGC TGGATAGAAA GAACGAGCTG
GGTGCCATTG CACCGGGTTT CTTTGCTGAT ATTGTCGCCG TTGATGGCGA TCCATTGTCC
GACATCAATG TGGTTATTGA CAACGTCCGC TGGGTTATGA AGGGCGGCAA ACCCGTAGTC
GATAAGCGAT GA
 
Protein sequence
MNNLYRLLFL VFFYFLISSI AASAQTTTLR FAKLITGQGD VITDAVVVVE GDKISKVASG 
EKNIPANTTL IDLRPMVAIP GLIDVHTHIT YYWDKTSGLS PWNSRMDPPT TVFLAQENAL
KTLETGVTTI RDLGSSGGMD MAMRDLINRG AMKGPRMFVA GNGLHISRAR VTPGVSTVDP
GRADGVDEVI KVVRQELGAG VDWIKIYGST GSAQNVTGFQ TFTQDEMKAA VDIARQAGKR
VAIHSYGPDG CKAAVLAGAA SVEHATDVEP ETFAEMVKRG TFYVPTVDHN RYYADHREEY
GYNAIIVKAL NNYTERNFKS LQLAVKMKVK IAMGSDAVFT GFGENTRELR WFVKAGMTPA
QALQTATVNA AELLDRKNEL GAIAPGFFAD IVAVDGDPLS DINVVIDNVR WVMKGGKPVV
DKR