Gene Slin_4527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4527 
Symbol 
ID8728291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5488539 
End bp5489615 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content54% 
IMG OID 
Productputative esterase 
Protein accessionYP_003389306 
Protein GI284039376 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.859606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCT CCTTACGTCT AGAATTGCGT ACGCACATCA CAGATGACCG ACCGGTATTT 
GTGTCGGGTA ATTTTTGTGA CTGGTTTCCC GATCTGGATC GCTTTCAGAT GCAGCCTGTA
GCGCCGGGCG AGTTTGTATA TGAGTTTCCG GAGGGCGTTG ATCTGCCTGA TACACTGGAG
TATAAATACA CGCGCGGTGG TTGGGATCAT GTAGAGCTGG GCGCTTCGGG CGAAGGAGTG
ACTAACCGCA GGGCTACTGT TTCACAATCG GTCGTGCAGG ATTATGTGCC CCACTGGCGG
TGGTTTGGCA TGCCGTTTAA TCCGGATTTT TTGCCGAAGA TTGAACTGCT GGGCGATACC
TTCGAGTCTC CTCAGCTGGG GGCCACCCGT CGGGTTCATG TGCTGCTTCC GCACGATTAC
GAGACCTCCA ACAAACAATA CCCCGTTCTG TATTTGCACG ACGGCCAGAA TCTGTTCGGC
GGTGGCGCGG GTTTCGGAAG CTGGGAGGTC GATCAGAAAA TGGCCCTGCT GGCCGCCCGG
AATCACCACG AGGTAATTCT GGTTTCCATC GACCATGCCA ATGATGAGCG CATCCGGGAG
TTCACCTTTA ACCGCACCCG CGCCGGTCAG GGGCGGGGTA AGTATTACCT CGATTTTATC
CTTCAAACCA TAAAGCCCCT CGTCGACAAG CGGTTTCGAA CCTTGCCCGA TGCGGCCCAT
ACCGGCGTTG GCGGTAGTTC GCTGGGTGGT TTGATCAGTA TTTATGCGGG CCTGCTGCAC
CCCGATGTGT TTGGTCGGCT GATGGTTTTC TCGCCTTCGC TCTGGATTTC CCCCAAAATC
TATTTCGACG CCATTCGCTT TCAGGCTCCT GTTCCCATGA AAATTTATGC CTACGGGGGC
GAGCAGGAGT CGATCTATAT GGTGCCTAAC ATTCAGCGCT TCAATGAATC ACTGGTTCGT
CAGAACTACG GCGGGCATTC CATTGATATT CGTGTATCCG TCGATCCCAC CGGTACCCAC
CAGGAAGCGC ACTGGAGTCG GGAATTCCCA AAGGCCGTAG AGTGGTTATT TTATTGA
 
Protein sequence
MAFSLRLELR THITDDRPVF VSGNFCDWFP DLDRFQMQPV APGEFVYEFP EGVDLPDTLE 
YKYTRGGWDH VELGASGEGV TNRRATVSQS VVQDYVPHWR WFGMPFNPDF LPKIELLGDT
FESPQLGATR RVHVLLPHDY ETSNKQYPVL YLHDGQNLFG GGAGFGSWEV DQKMALLAAR
NHHEVILVSI DHANDERIRE FTFNRTRAGQ GRGKYYLDFI LQTIKPLVDK RFRTLPDAAH
TGVGGSSLGG LISIYAGLLH PDVFGRLMVF SPSLWISPKI YFDAIRFQAP VPMKIYAYGG
EQESIYMVPN IQRFNESLVR QNYGGHSIDI RVSVDPTGTH QEAHWSREFP KAVEWLFY