Gene Slin_4516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4516 
Symbol 
ID8728280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5474929 
End bp5475765 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389295 
Protein GI284039365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTTT TTTTTGAACG AGATGAAATC CAACAAAGCC AGGACACCGT AAATGTTTTC 
GAACCGTCTG ATAAGCCTGC GGTTATGTTG TTACTACACT TAATTTATTA CGACGTTATG
AATAAGCAAC AGAATGAAAC TGGCCTGACC ATGTTACCCG GCCAGTTGGA GCCGGTTCGA
GTAGGTCGCC GGTTGTTTCT TCGCTACGCG GGTGCTTTTG CCGCAGGAGG AGCCATCCTG
GCATCCTGCA AGGAGGGCGA AGAAAACCCT ACTACCGTAA TGGCCCCCGT TGACCTCGGC
ACTGGTGACG TTGGCATCCT GAACTATGCC TTTGCCCTTG AGCAACTCGA AGCCGCTTTT
TATACTCAGG TCATTGCCAG TCCCTTCACA GGCATGACTG ATGCCGAAAA AGCCATTCTA
ACGGATATTC GCGACCACGA AATCATTCAC CGCGAATTTT TCAAAGCTGC CATTCCGGCT
GCCAACCGCA TTGGTGATCT GGTACCTAAT TTCAGTAGCA TCAACTTCAG CGACCGGGCC
AGCGTTCTTG GCACTGCCAA AGCGTTTGAA GATCTGGGTG TAGCCGCTTA TAATGGTGCT
GGCACATTGA TTACAGACGT GAATTACCTG GCGCTGGCCG GTAAGATTGT ATCGGTAGAA
GCCCGTCATG CAGCGGCCAT TCGTGATCTG CTGAATCCGA AATCAGCTGA TTTTGCCGGT
GATGATGTGG TATCGCCTAC TACCGGTCTG GATGCGGCCA CCCCGCCTTC TGCGGTGTTG
CCAATTGCCC AGAAGTATGT AAGAACACCG ATCACAGCCA CCAATCTACC CAAGTAA
 
Protein sequence
MRLFFERDEI QQSQDTVNVF EPSDKPAVML LLHLIYYDVM NKQQNETGLT MLPGQLEPVR 
VGRRLFLRYA GAFAAGGAIL ASCKEGEENP TTVMAPVDLG TGDVGILNYA FALEQLEAAF
YTQVIASPFT GMTDAEKAIL TDIRDHEIIH REFFKAAIPA ANRIGDLVPN FSSINFSDRA
SVLGTAKAFE DLGVAAYNGA GTLITDVNYL ALAGKIVSVE ARHAAAIRDL LNPKSADFAG
DDVVSPTTGL DAATPPSAVL PIAQKYVRTP ITATNLPK