Gene Slin_4509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4509 
Symbol 
ID8728273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5467631 
End bp5468662 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content57% 
IMG OID 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003389288 
Protein GI284039358 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC TCGTTCTTAC AGAATACAAT CACTTTGACT TACAGGAAGT CCCCAAGCCT 
TCTATCCGTC CCAACGAAGT GCTGGTGCGC GTGCAGGCCG TGGGTATCTG CGGCTCCGAT
GTGCACGGCA TGGATGGCAG CAGCGGCCGA CGCATTCCGC CCATCGTGAT GGGCCACGAA
GCCAGCGGCA TCATTGCCGA AGTGGGCAGC GACGTAAAAA ACTGGGCTAC CGGCGACCGC
GTCACCTTCG ATTCGACGGT GTACGTGCTC GACGACTGGT ACAGCCGCCG GGGGCAGTAC
AACCTGAGCG ACGGCCGCGA AGTCGTGGGC GTTTCGACGC CCGATTTTAA GCGTAATGGT
GCCTTTGCCG AGTATGTAGC CATACCACAG CATATTTTAT ACGCCGTTCC TGATAACGTT
AGCTTTACTC AGGCCGCGCT TGTGGAGCCG GTGGCCGTGG CACTCCACGC CGTTAGTCTG
ACGCCCATTC AGGTCAACGA TTCGGCGGTG GTAGTTGGGT CGGGTATGAT TGGCCTGTTC
GTAATTCAGG TGCTGAAACT GGCGGGTTGC GGAACGATCA TCGCCATTGA CCTGGACGAC
GACCGGCTCG CATTAGCTCA AAAACTTGGC GCTACACACA GCATAAACGC GAAAAGTGGC
GACGTAGCCA AACAGGTACA GGATCTGACG CACGGTCGCG GTGCCGATGT TTCCTTTGAA
GTCGTAGGAG CCGGACCAAC CGTGAAAACC GCCATCGACT GTGTTCGGAA AGGAGCCACG
GTCACGCTGG TCGGAAATCT GGCGCCAACC GTCGAGATGC CTTTGCAGGC TATTGTGACT
CGTCAGCTTC GGCTACAGGG CTCCTGCGCC ATCAACGGCG AGTACGAAGC GGCACTGGCC
CTGATCTCGT CCGGGCGGAT GAACGTTGAA GCCATTCTGA GTGCCGAAGT GCCGCTGGAA
GAAGGCGCCG ACTGGTTCAA GCGGCTTTAT GAAAAAGAGA AAGGACTGAT AAAAGTGGTG
CTGAAACCTT AA
 
Protein sequence
MKALVLTEYN HFDLQEVPKP SIRPNEVLVR VQAVGICGSD VHGMDGSSGR RIPPIVMGHE 
ASGIIAEVGS DVKNWATGDR VTFDSTVYVL DDWYSRRGQY NLSDGREVVG VSTPDFKRNG
AFAEYVAIPQ HILYAVPDNV SFTQAALVEP VAVALHAVSL TPIQVNDSAV VVGSGMIGLF
VIQVLKLAGC GTIIAIDLDD DRLALAQKLG ATHSINAKSG DVAKQVQDLT HGRGADVSFE
VVGAGPTVKT AIDCVRKGAT VTLVGNLAPT VEMPLQAIVT RQLRLQGSCA INGEYEAALA
LISSGRMNVE AILSAEVPLE EGADWFKRLY EKEKGLIKVV LKP