| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4500 |
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| Symbol | |
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| ID | 8728264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5454578 |
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| End bp | 5456149 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003389279 |
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| Protein GI | 284039349 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTACC TGAACCGTGG CCTGCTGACA TTCGGGCTAA TGAGTGCGGT GCTGGCTGGC
CTGACAACAG GAGCACGCGC CAAAACTCCG ATTCAACTGG ACAGTACAAT CGTCAAAAAA
GACACTATTG CGCTCGTACC AACGGTGCCC GACAGTTTGT TACGTGGGCG GCTGGCGAAG
CTGCAAAAAT CTATTCCATT GAATTACCAC AAGGCCGTAC AGGCTTATGT GGACTACTTC
ACGTTCCGCA AAGCCAGCAC TACCAAGACA ATGCTGGAAC GTATGCCCCT TTTCTTTCCG
CTCTATGAGC GCGTGCTGGC TCAGTACGGT CTCCCCGATG AATTCAAATA CCTGTCAATT
GTCGAGTCGG CGCTGAATCC ACGGGCTATT TCGAGAGCAG GTGCCGGGGG CCTCTGGCAG
ATTATGCCCG GCACCGGCCG CGATTTACGG CTGTATCAGG ACGATTATGT CGATGAGCGC
ATGGACCCCG TTAAAGCAAC GGAAGCCGCC TGTAAATACC TGCGCGATCT GTATAATATC
TTTGGCGACT GGGAGCTGGC GATGGCCGCC TATAACTGTG GCCCAAATGC GGTCAAACGT
GCTATGCGCC GGTCGGGGGG CGATTCCTTC TATACAATTT ACGATGCACT GCCGAAAGAA
ACCCGCGGCT ATGTACCGCA GTTTGTCGCG TTTACCTACC TGATGAATTA CGCCAGTGAT
CACGGTATTG TAGCCGAAAA GTATGAATAC CCCATTCCTC ACGATACCAT TCAGGTGAGT
GGCTACTTCA ACCTCGAAAC GTTTGCCAAA CACAGCAGTA TGGCATTGGC CGATCTGCAA
AAAATGAATC CGGCCATCAC AACAACCATT TTACCGGAAT ACACAAACCA TTACCCGCTC
CGGGTGCCTC GGGAACAGTA CGGCTATTTT GCCAGTCGCA GACGAGCCAT TCTGGACTCA
GCGAGCCGAC GCCCAAATGT TATGGAGCAT AGTTTGCTGG CAAGTGCTGA AGATGTTCGG
TATGGCACCG ATACAATGGG TGCCTGGAAT GAACTAGGCC GAAACCCACT GGCACGTATC
AGTCTGGGAG AACCGCTGAC AGACCGGGTA AACGATGAGG CAAGACTCGC GAATGCCGAA
TCGGCCGATG AGCCCGAAGA AGATATCGAA ACGGTGGTGT TGCGTAAGCC TAAAAAGCAA
ACCTACGTTG TCAGAAAAGG CGATAACTTA TTGCAAATTG CCAACCGGTA CAACGTCGAA
CTTTACGATC TAAAGCGCTG GAACCATTTA CGGTCTACCA GTATCCGGCG GGGACAAAAA
CTGGTTATCC TGAAAGAGGT TGCCGAAACC CGTGCTGAGC GACTCGCCGA TCAGGGAACC
GCTAAAAGCC GTAAAAAAGC TGAAGTACTG GCAAAGTCGA AGCATTACAA ACCCCGCTAC
CACCGCGTAC AAAGTGGTGA TACGCTCTGG AACATCGTTC AGCGGTACGA CCTAACCATC
GACCAGCTTA AACGAATGAA CCACATCCGG AGTAATTCAT TACGGCCCGG TCAAAAACTG
ATAGTAGGGT AG
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| Protein sequence | MNYLNRGLLT FGLMSAVLAG LTTGARAKTP IQLDSTIVKK DTIALVPTVP DSLLRGRLAK
LQKSIPLNYH KAVQAYVDYF TFRKASTTKT MLERMPLFFP LYERVLAQYG LPDEFKYLSI
VESALNPRAI SRAGAGGLWQ IMPGTGRDLR LYQDDYVDER MDPVKATEAA CKYLRDLYNI
FGDWELAMAA YNCGPNAVKR AMRRSGGDSF YTIYDALPKE TRGYVPQFVA FTYLMNYASD
HGIVAEKYEY PIPHDTIQVS GYFNLETFAK HSSMALADLQ KMNPAITTTI LPEYTNHYPL
RVPREQYGYF ASRRRAILDS ASRRPNVMEH SLLASAEDVR YGTDTMGAWN ELGRNPLARI
SLGEPLTDRV NDEARLANAE SADEPEEDIE TVVLRKPKKQ TYVVRKGDNL LQIANRYNVE
LYDLKRWNHL RSTSIRRGQK LVILKEVAET RAERLADQGT AKSRKKAEVL AKSKHYKPRY
HRVQSGDTLW NIVQRYDLTI DQLKRMNHIR SNSLRPGQKL IVG
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