Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4487 |
Symbol | |
ID | 8728251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5437892 |
End bp | 5438482 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | Thioredoxin-related protein-like protein |
Protein accession | YP_003389266 |
Protein GI | 284039336 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000975236 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.16082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGTC TGCTTCTTTT TTTCGCAGCT TTCGTTTTGC TCACGATCAG CGCGTTCCGA ACCACATTGC CCACGGAGTC AGCCATAATT ACCCCGCCTA ACGAAACTAA ACACATCAAA TGGCTAACTA TTCAGGAAGC GTACGCCCTG ACGCAAAAAA AGCCGAAGAA ATTTGTGGTA GACGTTTACA CCGATTGGTG CGGCTGGTGT AAAGTAATGG ATCGCGAAAC CTTCTCGAAA CCCGCTATTG TCGACTACGT AAACGAGAAT TTCTACGCCG TCCGGTTCAA CGCCGAGCAA ACCGCCGATG TAACCCTGGG CAAACAAACC TTCAAGTACA TCAGCGGTGG AAGCCGGGGT GTTCATGAAC TGGCCGCTGC CTTACTGAAA AACCAGATGA GTTATCCGAC GACGGTCTTT CTGGACGAAA AGTTTAATTT GATTCAGCCC ATACCCGGCT ACCTGGAGCC AAGAACATTC CACCAGATTA TTACCTATTT TGGGAAGAAC TACCACCAGA AAGAGCCATT CGATCAGTAC AAAACAGGTT CATACAAAGA ATTTCAATCG TCGCTGACGG CAGGTCGATA A
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Protein sequence | MNRLLLFFAA FVLLTISAFR TTLPTESAII TPPNETKHIK WLTIQEAYAL TQKKPKKFVV DVYTDWCGWC KVMDRETFSK PAIVDYVNEN FYAVRFNAEQ TADVTLGKQT FKYISGGSRG VHELAAALLK NQMSYPTTVF LDEKFNLIQP IPGYLEPRTF HQIITYFGKN YHQKEPFDQY KTGSYKEFQS SLTAGR
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