Gene Slin_4487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4487 
Symbol 
ID8728251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5437892 
End bp5438482 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content48% 
IMG OID 
ProductThioredoxin-related protein-like protein 
Protein accessionYP_003389266 
Protein GI284039336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000975236 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.16082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGTC TGCTTCTTTT TTTCGCAGCT TTCGTTTTGC TCACGATCAG CGCGTTCCGA 
ACCACATTGC CCACGGAGTC AGCCATAATT ACCCCGCCTA ACGAAACTAA ACACATCAAA
TGGCTAACTA TTCAGGAAGC GTACGCCCTG ACGCAAAAAA AGCCGAAGAA ATTTGTGGTA
GACGTTTACA CCGATTGGTG CGGCTGGTGT AAAGTAATGG ATCGCGAAAC CTTCTCGAAA
CCCGCTATTG TCGACTACGT AAACGAGAAT TTCTACGCCG TCCGGTTCAA CGCCGAGCAA
ACCGCCGATG TAACCCTGGG CAAACAAACC TTCAAGTACA TCAGCGGTGG AAGCCGGGGT
GTTCATGAAC TGGCCGCTGC CTTACTGAAA AACCAGATGA GTTATCCGAC GACGGTCTTT
CTGGACGAAA AGTTTAATTT GATTCAGCCC ATACCCGGCT ACCTGGAGCC AAGAACATTC
CACCAGATTA TTACCTATTT TGGGAAGAAC TACCACCAGA AAGAGCCATT CGATCAGTAC
AAAACAGGTT CATACAAAGA ATTTCAATCG TCGCTGACGG CAGGTCGATA A
 
Protein sequence
MNRLLLFFAA FVLLTISAFR TTLPTESAII TPPNETKHIK WLTIQEAYAL TQKKPKKFVV 
DVYTDWCGWC KVMDRETFSK PAIVDYVNEN FYAVRFNAEQ TADVTLGKQT FKYISGGSRG
VHELAAALLK NQMSYPTTVF LDEKFNLIQP IPGYLEPRTF HQIITYFGKN YHQKEPFDQY
KTGSYKEFQS SLTAGR