Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4485 |
Symbol | |
ID | 8728249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5435016 |
End bp | 5435552 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389264 |
Protein GI | 284039334 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000138538 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.403857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTGC CACAACTTAT ACTTGCTTCC CTGGTACTTA TGCTATCCTG TCAAACTAAA CCGAAGCAGG AAGCGAAAAC GCCGAGTACA ACAGCCGTTG ACGATAGTGC AACTGCCTTA TCGAAACGGC CCGGACCGGA TACACCCCGT TCTGCCGCCG ATCGTTTGGT GAGGGCACTT TATTTTGAGC ATAACAAAAC GGAAAACCCC CTGCGTGAGA CAAAAGATCG GGCGCTTATC GAACAGTTTT TTACAAAATC AACGGCCGAA CTCATCTGGA ATGACGCTCA GAAAGCAACG GGTAAGCTAA ATAGAAAAAA AATAAATGGC CTGTATAATG CCCCCGATGA GGCTATAAAA AAGACTTGGG TGCTACCTGC AGTTGTTGGC GGAACAAGAG CCATTGTCTA TGTAACATTT GAGAACAAGG CTAAACCTGA GGAAATTAGA GTAGATATGC AGCAGATGGG TGGTCGATGG CGCATCACAA ACCTACATTA TCCTGACGGG ACCTTGTTGA CCCAAGTAGT TCAATAA
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Protein sequence | MRLPQLILAS LVLMLSCQTK PKQEAKTPST TAVDDSATAL SKRPGPDTPR SAADRLVRAL YFEHNKTENP LRETKDRALI EQFFTKSTAE LIWNDAQKAT GKLNRKKING LYNAPDEAIK KTWVLPAVVG GTRAIVYVTF ENKAKPEEIR VDMQQMGGRW RITNLHYPDG TLLTQVVQ
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