| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4474 |
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| Symbol | |
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| ID | 8728234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5415495 |
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| End bp | 5418062 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003389253 |
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| Protein GI | 284039323 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.18025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAA TTTTAGCTTC CACTTTTTTG ATCGGGATTT TCTTTCTTCC CTTACTTGTA
TCCGCTCAAA ATGCCCCTGT CATCAATGCA ACGGTAACTG GAAAAGTCAT TGACGCCCGC
ACCGAAAAAA GCCTTATTGG CGCAACGGTG GTCATTAAAG GAACAACCAA CGGAGGAGCC
ACCAACCAAA ACGGCCAATT TACGTTGCTT ACCGGCCAGA AACTGCCCTT TGTTGTGACC
GTCTCTTACT TAGGTTATCA GACACAGGAC GTTGTCTTAA GCAGCGATAA CGTCGAAATC
AAGCTTGAAG AAGGGGCCAA TCAACTAGCC GATGTAGTTA TTACGTCCCG GCGTCGTCAG
GAGTCGGCCC AGGACGTGCC CATTCCAATT ACGGTCGTCA GTGGTGTACG CGCCGAAGAT
GCCGGTGCTT TTAACGTAAA CCGGTTGAAA GAGCTGGTAC CAAGTGTGCA GCTTTACTCA
TCAAATGCCC GGAATACAAC CTTGAACATT CGTGGGCTGG GGTCGAGTTT TGGGCTTACC
AACGATGGGA TTGATCCGGG CGTTGGCTTC TACGTGGATG GCGTGTATTA CGCCCGGCCA
GCCGCTACCT CGCTTGATTT TATCGACATC GATCAGGTTG AAGTACTTCG TGGGCCGCAG
GGAACATTGT TTGGTAAGAA CACGACTGCC GGTGCCTTCA ACATCACAAC CCGCGCCCCG
AGTTTCCAGC CCGGTGCCAG CTTTGAAGTG AGCTACGGTA ACCTCAATTA CATTCAGGCA
AAAGCCTCTC TGACCGGCCC CATCAGCAAA AAACTAGCCG TCAGGGCTTC TTTTTCGGGA
ACACAGCGCG ATGGAACCAT TTACAACATC ACGACGCTGA AACCAACCAA CACACTGAAT
AACCTGGGCT ACCGGGCGCA ACTGCTGTAT ACTCCATCCG ATAAGGTTAA AATTACTTTT
GCAGGCGACA ACTCCCGCCA ACGGCCCGAC GGTTATGCCA CTGTTGTTGC CGGGGTCGTA
ACGACAAAGC GGGCTGCTTA CCGGCAGTTT AACAACATCA TTGCCGACTT AGGCTACAAG
CTACCGAGCA CGAACCCATT CGACCGGGTT ACAGATACCG ATACCCCCTG GCGGTCAAAC
AACGATTTCG GTGGTGTTTC AGTGAATGTC GACGCTAAAA TCGGTAGTGG TACCCTGACG
GCAACAACAG CTTACCGGTA TTGGATATGG GACCCCTCCA ACGACCGGGA TTTTACCGGC
CTACCGGTGC TAACCAAATC GCAGGGTAAC TCGCGGCATA CCCAATGGAC GCAGGAGATT
CGGTACGCGG GTCAGTTTTC GTCAAAACTT AGTGGCGTTT TCGGTGTCTT CTTCATTGAT
CAGGACCTGA AATCAGATCC GGTTCAGACA GAAGAATCCG GTTCAGCGCA ATGGCGGTTC
TCACAGAGTT CGACCAGCGC CCTTTGGAAA ACCCCCGGTT TGTTCGATGG CTTTGGTACC
AAAACAACCT CACGGCTCAA GACCATCGGC GCAGCTGTAT TTGGCCAGGT CGATTGGGCC
ATTACCGACA AATGGCACTT GCTACCAGGA CTCCGTTTCA ATTATGACAA AAAGGATGTC
GACTACAAAC GCGAAACGTA CGGCGGTCTG CAAACCACCG ACCCCGCTTT GATTGCCCTC
AAAAACGCTA TCTATACCAA TCAGGCATTC GCTTTTGGCG TTGAGGATAA CAACTTTTCA
GGTCAGCTGA CACTTGCATA CCGTTCCAGT AAGCGATTTA ACGCTTACGC TACCTATGCA
AACAGCTATA AGCCGGTTGG CGTAAATCTG GGCGGATTAC CAACGGCAAA CGGGGCAGTC
CTGATTGATT TAGCGAAAGT GAAGCCGGAG TATGTGACCC ATTACGAACT GGGGGTAAAA
ACTAAACCGA CACCGAGTTC AACCTTTAAT GTAACAGTTT ACAATACCGA GATCAAGGAC
TACCAGACGC AGGTTCAAAC GGCCGAAGTT GGCGTAAACC GTGGGTATTT AGCCAATGCC
GAGAAAGTTC GGGTGCAGGG TGTCGAAGTT GATGGAAATA TCCGGCTCAA TAATAGTTTT
TCTCTGAACG GAGCCGTCTC CTACACCGAT GGCAAATATG TGTCGTTCAA GAATGCTCCC
GTCCCGCTGG AAGAGACAGG TGGTGAGTCA GCGTTCAAAG ATATTTCGGG TGGTGTCCTT
CCCGGCATCT CCAAGTGGTC TGGCTCGCTG GGTGGCGAAG TATCCGGTAA CGGTAAGCTG
TTAAATCAAG ATGGCCGATT CTTCCTCGCC GTCGATGGAT ATTATCGTTC GTCGTTCTCA
TCGAGCGCAT CGCCCTCGGC TTTCCTGAAC ATCGACGGTT ACACGTTGCT CAATGCCCGA
GTTGGCTTTC GTGCCTCCAA TGGGGTGTCG GTTCTGCTAT GGTCCCGGAA TCTGACGAAC
AAAAATTATT TCGAACAACT GTTGCCAGCC GCTGGTAATG CAGGTCAGTA CGCGGCAGTA
CTTGGCGATC CCCGAACCTA CGGCACTACG TTACGGTATA CTTTTTAA
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| Protein sequence | MKRILASTFL IGIFFLPLLV SAQNAPVINA TVTGKVIDAR TEKSLIGATV VIKGTTNGGA
TNQNGQFTLL TGQKLPFVVT VSYLGYQTQD VVLSSDNVEI KLEEGANQLA DVVITSRRRQ
ESAQDVPIPI TVVSGVRAED AGAFNVNRLK ELVPSVQLYS SNARNTTLNI RGLGSSFGLT
NDGIDPGVGF YVDGVYYARP AATSLDFIDI DQVEVLRGPQ GTLFGKNTTA GAFNITTRAP
SFQPGASFEV SYGNLNYIQA KASLTGPISK KLAVRASFSG TQRDGTIYNI TTLKPTNTLN
NLGYRAQLLY TPSDKVKITF AGDNSRQRPD GYATVVAGVV TTKRAAYRQF NNIIADLGYK
LPSTNPFDRV TDTDTPWRSN NDFGGVSVNV DAKIGSGTLT ATTAYRYWIW DPSNDRDFTG
LPVLTKSQGN SRHTQWTQEI RYAGQFSSKL SGVFGVFFID QDLKSDPVQT EESGSAQWRF
SQSSTSALWK TPGLFDGFGT KTTSRLKTIG AAVFGQVDWA ITDKWHLLPG LRFNYDKKDV
DYKRETYGGL QTTDPALIAL KNAIYTNQAF AFGVEDNNFS GQLTLAYRSS KRFNAYATYA
NSYKPVGVNL GGLPTANGAV LIDLAKVKPE YVTHYELGVK TKPTPSSTFN VTVYNTEIKD
YQTQVQTAEV GVNRGYLANA EKVRVQGVEV DGNIRLNNSF SLNGAVSYTD GKYVSFKNAP
VPLEETGGES AFKDISGGVL PGISKWSGSL GGEVSGNGKL LNQDGRFFLA VDGYYRSSFS
SSASPSAFLN IDGYTLLNAR VGFRASNGVS VLLWSRNLTN KNYFEQLLPA AGNAGQYAAV
LGDPRTYGTT LRYTF
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