Gene Slin_4465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4465 
Symbol 
ID8728225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5407817 
End bp5408416 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389244 
Protein GI284039314 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.463619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCGA CCATTAATCA AAATACCATG AAGAAAACAG CTTTACTTCT CGGGTTCATT 
CTTTTTACCA TTGCAACAGC CAGTGCCCAG ACGTTCAGGG GTCTCGACAA AACTCCGATG
GACATGGCGT ATTATCCGGA CGACTATGCC CATGACCGCA AGTTTGCGCC CGCCAAAATT
GGCACCGATA AGGCAATGGT CCGTATCACC TACAATCGTC CCTTTAAGAA CGGCCGTGAG
GTTTTCGGGA AGCTTGTGCC TTACGGCAAG GTATGGCGGG CCGGTGCCAA TGAAGCCCCC
GAAATCAAAT TTTATCAGGA TGTAACGATC GGTGGCAAAA AAATACCGGC CGGAAGCTAT
GCTTTGTTAA CCATTCCTAA TGAAAACGAA TGGACAATCA TCATCAGCTC CGACGTTGAC
CAATGGGGCG CTTACAGCTA CAATGAAAAG CTCGATGTAG CTCGCGTAAA TGTGCCGGTA
CAGAAGGCCG AAACGCCATT GGAAAACTTC TCTATCCAGT TTGCCAAGAA AGACGCTAAA
AACGCTGTTA TGTACATGGG TTGGGACACA ACGGTCGTGG CCGTCCCCAT TGGCTTGTAA
 
Protein sequence
MSSTINQNTM KKTALLLGFI LFTIATASAQ TFRGLDKTPM DMAYYPDDYA HDRKFAPAKI 
GTDKAMVRIT YNRPFKNGRE VFGKLVPYGK VWRAGANEAP EIKFYQDVTI GGKKIPAGSY
ALLTIPNENE WTIIISSDVD QWGAYSYNEK LDVARVNVPV QKAETPLENF SIQFAKKDAK
NAVMYMGWDT TVVAVPIGL