Gene Slin_4462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4462 
Symbol 
ID8728222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5403864 
End bp5404706 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content54% 
IMG OID 
Productpantoate/beta-alanine ligase 
Protein accessionYP_003389241 
Protein GI284039311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGTT TTGACACCAT TACCGCACTG CGTCATCAGT TGAGTTCCCT GCGGTCTGAA 
CACCGAACCA TTGGGCTCGT ACCAACCATG GGCGCGTTGC ACGAAGGTCA TCTGACACTT
GTCGATACGG CTCGTCGCGA AAACGACGTG GTCGTGAGCA GCATCTTTGT AAATCCGGTT
CAATTCAACA ACGCCGACGA TCTTGCCCGT TATCCGCGTA CCCTGGAAGA AGACTGCCAG
AAACTCGAAT CGGCCGGCTG TGATGTGGTA TTTGCCCCTT CAGTAGCCGA GATATACCCC
GAGTCGCCAA CATTAAAAAT AAATTTCGGT GAATTGGAGA CAGTCATGGA AGGGGCCTTC
CGGCCGGGTC ATTTTAACGG CGTGGGCATT GTTGTCGCCA AGCTGTTCAA CATCATACAG
CCCGATAGAG CCTACTTCGG CCAGAAAGAT CTGCAACAGG TGGCCGTAAT CCGGCAGTTG
GTTCGCGACC TAAGTATTCC CGTTGAGCTG GTTCGATGCC CGACCGTCCG GGAGGCCGAT
GGACTGGCTA TGTCGTCACG GAACCGGAAT CTCTCGCCCT ATGAGCGGGA ACAGGCTACG
GCCCTCTTTA AGGCCCTTAC GCTGGCCCGG GAGTTATTGG CGGATGGTCA TAGTCCTTCG
CAGGCGAAAG CGGCTGTAAC CGGCTTTTTT ACGGGCAATC CGCATTTCCG GTTAGAATAC
GTCGAGATCG TGAATGCCGA CACGCTCCAA CTGGCCAATG AAGTGCTGGC ACCGGGGCAA
ACCGCCATTT GTTTAGCAGC TCATCTGGGG AACGTCAGGC TGATTGATAA TCTGGTCTTC
TGA
 
Protein sequence
MLRFDTITAL RHQLSSLRSE HRTIGLVPTM GALHEGHLTL VDTARRENDV VVSSIFVNPV 
QFNNADDLAR YPRTLEEDCQ KLESAGCDVV FAPSVAEIYP ESPTLKINFG ELETVMEGAF
RPGHFNGVGI VVAKLFNIIQ PDRAYFGQKD LQQVAVIRQL VRDLSIPVEL VRCPTVREAD
GLAMSSRNRN LSPYEREQAT ALFKALTLAR ELLADGHSPS QAKAAVTGFF TGNPHFRLEY
VEIVNADTLQ LANEVLAPGQ TAICLAAHLG NVRLIDNLVF