Gene Slin_4458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4458 
Symbol 
ID8728218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5400911 
End bp5401573 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content52% 
IMG OID 
Productprotein of unknown function DUF1345 
Protein accessionYP_003389237 
Protein GI284039307 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACAC ACCCTCTGCA ATCGATTGCC CGTCTGGACT CTCAACACCG GCTAGTGATC 
GGGTTTTTCG CAGCAGTCAT TGCATATTTC GCCGTTCCGA CCAGGTTCAG TATAGCTGCC
CACCTGACCA TTGTGTGGAT AACGTTTGCC GTAACGATAC TAGCTCTGAT GTGGACGAGT
ATCGGTAGCA CGCATCCCCG CGACCTGCCC AGGCTGTCAC GACTGGAGGA TTCGAGCCGA
ACGCTGATTC TGCTTTTTGT GGTTGTAGCC GCTGTAGCCA GCCTTTTCGC CGTTATTGAA
TTACTCGATT CAACAGATAA GCATGCCCCG GAGTGGACTC GAAACCGACT GCTTGCCATC
TCGGCCATTG CCAGCGGCTG GACGCTCGTA CATTCGGTTT TTACGCTTAG ATACGCTCAT
TTGTATTACG GCAATGACAA GAGCCTAAAA ACACGCCCGG GTGGTCTGGA CTTCCCAAAC
GAGTCTGAAC CCGACTACAT CGATTTTGCT TATTTCTCGT TTGTGATTGG CATGACCAGT
CAGGTTTCCG ACGTAGCAGT TAGCTCAAAA CCCATGCGTC GGACAGCATT GGTCCATGGC
GTCCTGTCGT TTGGGTTCAA CGCTATTATC ATCGCCCTGA CGGTTGGGGG GCTAGCCGGT
TAA
 
Protein sequence
MSTHPLQSIA RLDSQHRLVI GFFAAVIAYF AVPTRFSIAA HLTIVWITFA VTILALMWTS 
IGSTHPRDLP RLSRLEDSSR TLILLFVVVA AVASLFAVIE LLDSTDKHAP EWTRNRLLAI
SAIASGWTLV HSVFTLRYAH LYYGNDKSLK TRPGGLDFPN ESEPDYIDFA YFSFVIGMTS
QVSDVAVSSK PMRRTALVHG VLSFGFNAII IALTVGGLAG