Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4458 |
Symbol | |
ID | 8728218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5400911 |
End bp | 5401573 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | protein of unknown function DUF1345 |
Protein accession | YP_003389237 |
Protein GI | 284039307 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACAC ACCCTCTGCA ATCGATTGCC CGTCTGGACT CTCAACACCG GCTAGTGATC GGGTTTTTCG CAGCAGTCAT TGCATATTTC GCCGTTCCGA CCAGGTTCAG TATAGCTGCC CACCTGACCA TTGTGTGGAT AACGTTTGCC GTAACGATAC TAGCTCTGAT GTGGACGAGT ATCGGTAGCA CGCATCCCCG CGACCTGCCC AGGCTGTCAC GACTGGAGGA TTCGAGCCGA ACGCTGATTC TGCTTTTTGT GGTTGTAGCC GCTGTAGCCA GCCTTTTCGC CGTTATTGAA TTACTCGATT CAACAGATAA GCATGCCCCG GAGTGGACTC GAAACCGACT GCTTGCCATC TCGGCCATTG CCAGCGGCTG GACGCTCGTA CATTCGGTTT TTACGCTTAG ATACGCTCAT TTGTATTACG GCAATGACAA GAGCCTAAAA ACACGCCCGG GTGGTCTGGA CTTCCCAAAC GAGTCTGAAC CCGACTACAT CGATTTTGCT TATTTCTCGT TTGTGATTGG CATGACCAGT CAGGTTTCCG ACGTAGCAGT TAGCTCAAAA CCCATGCGTC GGACAGCATT GGTCCATGGC GTCCTGTCGT TTGGGTTCAA CGCTATTATC ATCGCCCTGA CGGTTGGGGG GCTAGCCGGT TAA
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Protein sequence | MSTHPLQSIA RLDSQHRLVI GFFAAVIAYF AVPTRFSIAA HLTIVWITFA VTILALMWTS IGSTHPRDLP RLSRLEDSSR TLILLFVVVA AVASLFAVIE LLDSTDKHAP EWTRNRLLAI SAIASGWTLV HSVFTLRYAH LYYGNDKSLK TRPGGLDFPN ESEPDYIDFA YFSFVIGMTS QVSDVAVSSK PMRRTALVHG VLSFGFNAII IALTVGGLAG
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