Gene Slin_4422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4422 
Symbol 
ID8728182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5360647 
End bp5361198 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content43% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003389202 
Protein GI284039272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACTC GTTTAAGTGA TGAGGAGTTG ATTCGGCAGT ATCTGTCAGG CCAGCCCACG 
CACTGTTTTA AGGCTCTTTA CGACCGGTAC GTTAACAAAG TTTATCGACG ATGTTTGTCC
ATGACTAAAG ATCCTTTGAA AGCCGAAGAC TTTACCCATG ATATTTTTTT AAAAGTATTC
AATAAGTTAG ACGCCTTTCA GGAACGGTCG AGTTTTTCTA CCTGGCTATA TTCCATTTCG
TTTAATTACT GCTCCGACCA GATTCGACTG GCAAGACGGC TTCAGATAAC CGATATTGAG
GATAGTGCCA ATTACAATAT TCCAGACGTA ACAGAAGAGC ATCTGCATGA AGAGACGCTT
CATTTGGTAA ATCGGGCAAT GAAATCCTTG TCGGCAAATG AGCAGGCATT GCTGCGACTC
AAATACGAAG ATGGCATGAG CATAGCAGCC ATTAGCGCAA TGCTCGATCT TAAAGAAAGT
ACCGTGAAAA TGAGACTCAA ACGGAGTCGG GACAAGATTT ATAAACTGTA TAGCAGACTA
CACACGACCT GA
 
Protein sequence
MSTRLSDEEL IRQYLSGQPT HCFKALYDRY VNKVYRRCLS MTKDPLKAED FTHDIFLKVF 
NKLDAFQERS SFSTWLYSIS FNYCSDQIRL ARRLQITDIE DSANYNIPDV TEEHLHEETL
HLVNRAMKSL SANEQALLRL KYEDGMSIAA ISAMLDLKES TVKMRLKRSR DKIYKLYSRL
HTT