Gene Slin_4415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4415 
Symbol 
ID8728175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5350546 
End bp5351256 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content54% 
IMG OID 
Product2-phosphosulfolactate phosphatase 
Protein accessionYP_003389195 
Protein GI284039265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.587802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAA TTGACGTTTG CTTAACCCCG GAATTGTTAC ACCTCCACAC CGTTGAAAAT 
ACAATCGTTG TGGTGGCGGA TGTTTTTCGG GCTACATCGT GCATGGTGAC GGCCTTCGCC
TATGGCGTAA ACAGCATCAT TCCGGTGGCT ACCATTGAGG AATGCCGCGA CTGGCAGGAG
CGAGGGTATC TAGCCGCTGC CGAACGGAAT GCCCAACGTG TAGATGGGTT CGAGCTGGAT
AACTCGCCCT TCACGTACAT GGACGAACAG ATTCGGGGAG CCAATGTCGC CATGACCACG
ACCAACGGAA CCCTGGCCAT CACCAAATCG CGGTCGGCGG TGAAGGTGCT CGTGGGGTCA
TTTCTGAATC TGGACGCTAT TGCCCGCTTT TTACAAAGCG AGCGCTACGA TGTAATGGTA
CTGTGCGCGG GCTGGAAAGG CCGCGTCAAC ATGGAAGATA CCCTCTTTGC CGGGGCGCTG
GTAGATCGGC TGAAAGACAG CTACGCGATG GCCGAAGATA GCGCCATTAT GTCGTGGCGG
CTCTATTGCC AGGGGAAAGA CAATTTGCCA AGCTACCTGG CCAATTCATC GCACATCCGT
CGGTTGCAGC GGCTGGGTAT CCAGAAAGAT ATTACCTACT GTTTACAGCA CGATCTGTAC
GACGTTGTTC CAGTTTTGCG GGGCAACGCG CTGGTGAGCA TGCAGGTTTG A
 
Protein sequence
MKQIDVCLTP ELLHLHTVEN TIVVVADVFR ATSCMVTAFA YGVNSIIPVA TIEECRDWQE 
RGYLAAAERN AQRVDGFELD NSPFTYMDEQ IRGANVAMTT TNGTLAITKS RSAVKVLVGS
FLNLDAIARF LQSERYDVMV LCAGWKGRVN MEDTLFAGAL VDRLKDSYAM AEDSAIMSWR
LYCQGKDNLP SYLANSSHIR RLQRLGIQKD ITYCLQHDLY DVVPVLRGNA LVSMQV