| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4412 |
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| Symbol | |
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| ID | 8728172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5348289 |
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| End bp | 5349623 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003389192 |
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| Protein GI | 284039262 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.615231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTACA GACTTTACAT AGTAGCGACT ATACTACTCA CCGCCGGGGC GGGTCGGGCA
CAAACCCCGT CGGTGCAACT ACCCGACGAC CTTCGGGCGC TGGTTCAGCA GGCAAACACC
AACTACCCCA GCCTGAAGCA ACAGCAGCAG CTTATTCAGG CGGGTGACCT ACGGGCAGAT
ATTGCCCGTA CGGCGCTTCG GCCCAACGTG AACGGGACAG CGTCTTATCA ATACCTTACG
CCCGTTGCCA AAGCTACGCT ACCGGTAGAC GGTGTGAACC GGACTATTCA GTTTCAGCCC
AATCACAATG TAAATGCCTC ACTTGGTGTT GGACAAACCA TTTACGACTG GGGCCGTACC
AACGCAGCGG TTCAGCAGGC GGCCGATAAC GTGCAGGTGC TCCGGCGGGG TCTCGAAATT
ACACAGCAAA CGCTGGCCTA TCAGGTCGCT GCGGCTTACT ATGGCGTCGG GTTTCTGCAA
CGGAGTTTGT CGGTACAGGA TTCAGTTATT CAGACCGCCG GTGCCAATGT GCGACTTTTG
ACAACACGTC TGCAAAACGG CGATGCGCTG GAATATGATG TACTAACCCA GCAGGTACGG
GTAAAAACGG CGCAAAACCG GAAAATTGAA ATTCAGAATC AGTTGGAGCG TCAACTGGCT
TTTCTGACTT ACCTGACCGG CAATCCCAAT CCGGATGTAA GCCGGGCGAT GAGCCAGTTC
AACCTGGAAG CGTCGGGTGG TCGTGTAACA ACGCAACCGT TTCTAATGGC CGATGGACCG
AACCCGCTGG CAAGCAATAA AGATGTGCAA CTGGCGCAGG ATCGGGTTCG GCAGGCCGAA
ACGGACATTC TGGTATCGGA CTTATCCGGC CGTCCGAACC TGAGTTTTTC GGGTTCGGCA
GGCTACCGCA ACGGGTATCT GCCAGAGATC AATACCCCTC GCTTCAACAT AGCCGCAGGC
GTGTCGCTAA CCGTTCCTAT TTATGCCGGT AAGCGGTACC AACTGCAAAA CCAGGCGGCT
CAACTCAACC TGAACGCCAG CCGCTACGCC GTCGAGAACG CTAATGCTCA AGTGAGGCAG
ACTATTGCGC AACTCAACGC CGACATTCGC AGCAACCAAT CCCGCCTTAC CAACCTCGAA
ACGCAGGTGT TACAGGCACA AAAAGCGCTT CAGATTGCCA ACGCCCGGCT GCGAAATGGG
GTCATTACCA ATGTTGAGTT ACAGAGTGCC GAAACGGGTG TGGAAGAAGC CGAACTAGGT
CGATTAAATT TTCAATATCA GCTAATGCTC AATCAGCTTG AATTAAAACG ATTGCTGGGT
GAACCGTTGC TATAG
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| Protein sequence | MTYRLYIVAT ILLTAGAGRA QTPSVQLPDD LRALVQQANT NYPSLKQQQQ LIQAGDLRAD
IARTALRPNV NGTASYQYLT PVAKATLPVD GVNRTIQFQP NHNVNASLGV GQTIYDWGRT
NAAVQQAADN VQVLRRGLEI TQQTLAYQVA AAYYGVGFLQ RSLSVQDSVI QTAGANVRLL
TTRLQNGDAL EYDVLTQQVR VKTAQNRKIE IQNQLERQLA FLTYLTGNPN PDVSRAMSQF
NLEASGGRVT TQPFLMADGP NPLASNKDVQ LAQDRVRQAE TDILVSDLSG RPNLSFSGSA
GYRNGYLPEI NTPRFNIAAG VSLTVPIYAG KRYQLQNQAA QLNLNASRYA VENANAQVRQ
TIAQLNADIR SNQSRLTNLE TQVLQAQKAL QIANARLRNG VITNVELQSA ETGVEEAELG
RLNFQYQLML NQLELKRLLG EPLL
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