| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4406 |
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| Symbol | |
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| ID | 8728166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5340769 |
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| End bp | 5342661 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | ABC transporter related protein |
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| Protein accession | YP_003389186 |
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| Protein GI | 284039256 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.336146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTATC TCTCAGCCGA AAATTTATCA AAAACCTACG GCGACCGTAC TCTGTTTAAG
AACCTCACGT TTGGCATTAA CCGGGGTGAT AAAGTAGCTA TTGTTGGTGC CAATGGCTCC
GGCAAAACAA CGTTACTGTC CATTCTGGCT GGCGCCATGC CGCCCGATGC GGGCCTTGTG
AGTCACCGTA AAGACATCAG CATCGGCTAC CTCGACCAGC AGCCCGACTT CAATGATGCC
CTGACCGTGA TGGAAGTTGT GCTGGCGGGC GAAAGCGCTC AGCTCGATGC TGTGCGGGCT
TATGAGCATG CGCTGGCTCA CGAAGACAAT AAAGGTCTCG AACAAGCCAT GGCCGACATG
GAGAAACTCG AAGCCTGGGA TTACGAAGCG CAGATCCGGC AAATCCTGGG TGAATTAGGC
ATCCAGGATT TCGAGCAAAT TGTGGGCTCG CTATCCGGTG GCCAGCGCAA ACGCGTTGCG
CTGGCGCGGG TACTCATTCA AAACCCCGAT CTGATCATTC TGGATGAGCC GACCAACCAC
CTCGATCTGG AAGCTATCGA ATACCTCGAA AATTACCTGA ACACAAACAA CGGTACACTG
CTGATGGTCT CGCACGACCG GTATTTTCTC GACCGGGTCT GCAATCAGAT TGCCGAGATG
GACAACGGGC AGTTGTACAC GTACAAGGGT AATTACGCGT ATTTTCTGGA GAAAAAAGAC
GAGCGGGAAG CAGCCGCAGC CTCCGAACTG ACCAAAGACC GCAACACCTT CCGGCGGGAA
CTGGAATGGA TGCGTCGGCA ACCCAAAGCG CGGGGTACCA AAGCGCAGTA CCGCATTGAT
GCCTTTGAAG ACCTCAAAGA AAAGACCAGC GGCAAGAAGA ACGACGGCGA TCTGGACCTG
AATCTGCGCA TGGCCCGGCT GGGCAGCAAA ATTCTGGAAG TCGAGAATCT GAGCAAACGC
TTCGGCGAGA AAGTACTGCT CGACCATTTT ACGTACACCT TCAAACGCCC CGACCGCGTT
GGGTTGATCG GCAAGAACGG CATGGGTAAA ACCACGCTGA TGAACATGCT GACGGGGCAA
CTTCGGCCCG ACTCCGGTAA GATCAGCACG GGGGGCACCG TTAAGTTTGG CTACTACACT
CAAACCGAAC TGGACCTCCC CGAAAACCAG CGTGTTATTG ACGTGGTGCA GGATGTGGCC
GAAGTGATGA AACTGGCCAA CGGCGATACC ATCACGGCCA CGCAGCTCCT GAGCCGGTTT
CTGTTCGACC GATCCAAGCA GTATGATTTT GTTGCCAAAC TGAGCGGGGG CGAAAAACGG
CGTCTGCAAC TTTTACTGGT GCTGGTTCAA AACCCGAACT TCCTGATTCT GGATGAGCCT
ACCAATGATC TCGATATTAC CACGCTGAAC GTATTGGAGG ACTTTTTAAT TAACTTCCCC
GGCTGTGTGC TCATTGTTAC GCACGACCGG TACTTCATGG ATCGGCTGGT TGAGCACGTG
TTTGTGATGG AGGGCGAGGG AAAAGTGCGG GATTATCCGG GCAACTACAC AGATTACCGG
GAGTGGCGGG ATTCGCAACC CAAAGCTAAT GCACGGCCGG GTAAACCAGC AACGGCCGAT
GTTAAGAGCC AGGCAACGGC TCCCGTCGTT TCGTCGGTAC CGACGAATCA GAACGGAGCA
AAACGTAAGC TATCTTTCAA GGAAATTCGG GAGTACGAAA CACTTGAAAA AGATATTGAG
TCGCTGGAGC AACGGAAAAC TGAGATTGTG AGTCTCCTCA ACACGGGTGG CCACCATGAA
CAGTTGATAG CGTGGTCGCG GGAGATCGAA CAGATTGACC AGACCATTGC CGAGAAATCA
GACCGCTGGC TGGAGCTGGC GGAGTATATT TAA
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| Protein sequence | MNYLSAENLS KTYGDRTLFK NLTFGINRGD KVAIVGANGS GKTTLLSILA GAMPPDAGLV
SHRKDISIGY LDQQPDFNDA LTVMEVVLAG ESAQLDAVRA YEHALAHEDN KGLEQAMADM
EKLEAWDYEA QIRQILGELG IQDFEQIVGS LSGGQRKRVA LARVLIQNPD LIILDEPTNH
LDLEAIEYLE NYLNTNNGTL LMVSHDRYFL DRVCNQIAEM DNGQLYTYKG NYAYFLEKKD
EREAAAASEL TKDRNTFRRE LEWMRRQPKA RGTKAQYRID AFEDLKEKTS GKKNDGDLDL
NLRMARLGSK ILEVENLSKR FGEKVLLDHF TYTFKRPDRV GLIGKNGMGK TTLMNMLTGQ
LRPDSGKIST GGTVKFGYYT QTELDLPENQ RVIDVVQDVA EVMKLANGDT ITATQLLSRF
LFDRSKQYDF VAKLSGGEKR RLQLLLVLVQ NPNFLILDEP TNDLDITTLN VLEDFLINFP
GCVLIVTHDR YFMDRLVEHV FVMEGEGKVR DYPGNYTDYR EWRDSQPKAN ARPGKPATAD
VKSQATAPVV SSVPTNQNGA KRKLSFKEIR EYETLEKDIE SLEQRKTEIV SLLNTGGHHE
QLIAWSREIE QIDQTIAEKS DRWLELAEYI
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