Gene Slin_4405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4405 
Symbol 
ID8728165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5339585 
End bp5340589 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content52% 
IMG OID 
Productprotein of unknown function DUF323 
Protein accessionYP_003389185 
Protein GI284039255 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.629157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTAA AATATCTCTT ATCGACCATC GCCTTTTTAT CAGGTGTTCT GGCTCGTACA 
AGTGCCCAAA CCACAACTGA TTTCAAATCC TATACCCAAA CCGTGCCGGG GAGTAACCAG
ACCTATGCGC TGGTGGCTAT TCCGGGCGGA ACGTACATGA TGGGAAGCCC GGCCACCGAA
AAAGGCCGTA GTGCCGATGA AGGCCCGCAG CATAAAGTGC AGATCGAGCC CTTCTACATG
GGCAAGTATG AAGTGACCTG GGACCTGTAC GACCTGTTTG CCTTTACCAA TATGGAAAAG
GAGATGGCCG CTAAGTACAC CGAGTCAGAC GCAAATCTGA CAAAAACAGA TGCCACTACC
CGCCCTAGCC CTCCTTATGT CGATATGTCG TTTGGCATGG GGCGCGCGGG CTATCCGGCC
ATTAACATGA CTCAGTATGC AGCTATTAAG TTCTGCGCCT GGCTTTATGC CAAAACAGGC
GTGTTCTTTC GGTTACCTAC CGAAGCCGAG TGGGAGTATG CTTGCCGGGC CAATACCACA
ACGCCCTATT CATTCGGCGC TGACGTTAAG AAACTTGGCG AATACGCCGT GTTTACGGGC
AATAGCGACG GGGCTTATAA AAAAGTAGGA ACCAAAAAGC CGAATCCATT TGGCTTGTAC
GACATGCACG GCAACGTAAT GGAGTGGACA AAGGATCAAT ACATCGCCGA TTATTACAAG
CAGGTGGCCA GTGGCAAAGT AAAAGAGCCT TTTGCACCAA CTACAACGCT TTACCCCAAT
TCCGTACGGG GTGGCTCCTG GGATGATGCC GCTACCGTAC TTCGGTCGGC TGCCCGGACG
CCCTCGGCCC CGGCCTGGAA AGTACTTGAC CCCCAAAGCC CCAAATCGGA TTGGTGGCTG
ACTTCGGCCT CGTTTGTGGG TTTCCGGCTG GTTCGCCCCG CCAAAACGCC CAGTGAGGAA
GAGATCAAGG CGTACTACGA TATTAAACCG ATAAAGGACT ATTAA
 
Protein sequence
MRLKYLLSTI AFLSGVLART SAQTTTDFKS YTQTVPGSNQ TYALVAIPGG TYMMGSPATE 
KGRSADEGPQ HKVQIEPFYM GKYEVTWDLY DLFAFTNMEK EMAAKYTESD ANLTKTDATT
RPSPPYVDMS FGMGRAGYPA INMTQYAAIK FCAWLYAKTG VFFRLPTEAE WEYACRANTT
TPYSFGADVK KLGEYAVFTG NSDGAYKKVG TKKPNPFGLY DMHGNVMEWT KDQYIADYYK
QVASGKVKEP FAPTTTLYPN SVRGGSWDDA ATVLRSAART PSAPAWKVLD PQSPKSDWWL
TSASFVGFRL VRPAKTPSEE EIKAYYDIKP IKDY