Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4405 |
Symbol | |
ID | 8728165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5339585 |
End bp | 5340589 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | protein of unknown function DUF323 |
Protein accession | YP_003389185 |
Protein GI | 284039255 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.629157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTAA AATATCTCTT ATCGACCATC GCCTTTTTAT CAGGTGTTCT GGCTCGTACA AGTGCCCAAA CCACAACTGA TTTCAAATCC TATACCCAAA CCGTGCCGGG GAGTAACCAG ACCTATGCGC TGGTGGCTAT TCCGGGCGGA ACGTACATGA TGGGAAGCCC GGCCACCGAA AAAGGCCGTA GTGCCGATGA AGGCCCGCAG CATAAAGTGC AGATCGAGCC CTTCTACATG GGCAAGTATG AAGTGACCTG GGACCTGTAC GACCTGTTTG CCTTTACCAA TATGGAAAAG GAGATGGCCG CTAAGTACAC CGAGTCAGAC GCAAATCTGA CAAAAACAGA TGCCACTACC CGCCCTAGCC CTCCTTATGT CGATATGTCG TTTGGCATGG GGCGCGCGGG CTATCCGGCC ATTAACATGA CTCAGTATGC AGCTATTAAG TTCTGCGCCT GGCTTTATGC CAAAACAGGC GTGTTCTTTC GGTTACCTAC CGAAGCCGAG TGGGAGTATG CTTGCCGGGC CAATACCACA ACGCCCTATT CATTCGGCGC TGACGTTAAG AAACTTGGCG AATACGCCGT GTTTACGGGC AATAGCGACG GGGCTTATAA AAAAGTAGGA ACCAAAAAGC CGAATCCATT TGGCTTGTAC GACATGCACG GCAACGTAAT GGAGTGGACA AAGGATCAAT ACATCGCCGA TTATTACAAG CAGGTGGCCA GTGGCAAAGT AAAAGAGCCT TTTGCACCAA CTACAACGCT TTACCCCAAT TCCGTACGGG GTGGCTCCTG GGATGATGCC GCTACCGTAC TTCGGTCGGC TGCCCGGACG CCCTCGGCCC CGGCCTGGAA AGTACTTGAC CCCCAAAGCC CCAAATCGGA TTGGTGGCTG ACTTCGGCCT CGTTTGTGGG TTTCCGGCTG GTTCGCCCCG CCAAAACGCC CAGTGAGGAA GAGATCAAGG CGTACTACGA TATTAAACCG ATAAAGGACT ATTAA
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Protein sequence | MRLKYLLSTI AFLSGVLART SAQTTTDFKS YTQTVPGSNQ TYALVAIPGG TYMMGSPATE KGRSADEGPQ HKVQIEPFYM GKYEVTWDLY DLFAFTNMEK EMAAKYTESD ANLTKTDATT RPSPPYVDMS FGMGRAGYPA INMTQYAAIK FCAWLYAKTG VFFRLPTEAE WEYACRANTT TPYSFGADVK KLGEYAVFTG NSDGAYKKVG TKKPNPFGLY DMHGNVMEWT KDQYIADYYK QVASGKVKEP FAPTTTLYPN SVRGGSWDDA ATVLRSAART PSAPAWKVLD PQSPKSDWWL TSASFVGFRL VRPAKTPSEE EIKAYYDIKP IKDY
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