Gene Slin_4404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4404 
Symbol 
ID8728164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5339097 
End bp5339576 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content52% 
IMG OID 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_003389184 
Protein GI284039254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.840297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAACTA TTCTTCTCCT CGGCGCAAAC CTCGGCGACC GTGTTCAGAC GCTTAACCGG 
TCCGTAGATC TGATTTCAGA GCGTGTTGGA ACGATAGCTC AGCAGTCGGC TTTCTACGAA
ACGGCTCCCT GGGGCGTTAC CGACCAACCC GCTTATGTGA ATCAGGTGCT CGTCGTTGAA
ACTGCGCTGA AGCCCGACGA TGTTCTTGCA CAGACGCAGG GTATCGAGCA GGCACTCGGT
CGGGTGAGAC TGGAAAAGTG GGGTGCCCGC GTCATTGATA TTGACATACT GTATTACGAC
CAGCTCATTC AGCAAACGGA TACACTTACC ATTCCGCATC CGTTTCTACA CCAGCGACGC
TTTACGCTCG TGCCACTGGC AGAAATAGCC CCGGATTTTA TGCATCCTGT TTTACAGAAA
ACGACCCTTG AGTTACTGGC TGATTGTGAA GACGAAGGAG AGGTGATGCT AGTGTATTGA
 
Protein sequence
MKTILLLGAN LGDRVQTLNR SVDLISERVG TIAQQSAFYE TAPWGVTDQP AYVNQVLVVE 
TALKPDDVLA QTQGIEQALG RVRLEKWGAR VIDIDILYYD QLIQQTDTLT IPHPFLHQRR
FTLVPLAEIA PDFMHPVLQK TTLELLADCE DEGEVMLVY