| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4380 |
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| Symbol | |
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| ID | 8728140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5311984 |
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| End bp | 5313420 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003389160 |
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| Protein GI | 284039230 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.834955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.352412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC GAATACTGGC CATTCTAGCG GTAACAGCCA CCTTATCATC CTGTCAGGAT
TTCCTGAACC TTAAACCCGC TTACCAGATC AGCGATCAGG GTTTTTACCA GAATCAAAAT
GATTTCGAGA CGGCGCTGGT TGGTGTATAC AGCACCACAC GGGGGCTCTA TAGCAGCAGT
ACCATCCAGT ACGTAGGCGA CCTAACGACC GACAATGCCG AAATTCAGTG GTCGTCGCCC
TCGGCCGATG AGATGCAACT CGACCAGAAC GGCGTTACGG CAACGAATGC CTATATACGC
TCAGTCTGGA ATACCTGCCT GTACACCATC TCGCAATCCA GCAATATCCT GAACCGGATC
GATGCCGTTG CCTTTGACCC GACCGTTAAG AATCGGATTA AAGGCGAGGC CCAGTTTCTG
CGGGCGTTCA GCTATTTCTA CCTCGTGCGG ATGTTTGGCA ATGTTCCCGT CGCTACACAA
ACATTTACCA GTCCGGCTCA GGTGGCAGCC GCCGACTTGA CGCTCAAACC CAAAGAAGAG
GTGTATAAAC TGATCGTGTC GGACTTGACT AGTGCCGAAA CACTACTGCC CGCAACGGCC
GTGACGGACA AGACCAGAGC ATCGCAGATG ACCGTAAAAA CGTTGCTGGG CAAGGTCTAT
CTAACGCAGA AGAGTTATGA CCTGGCCGCT GCGAAGTTGA AGGAAGTTAT TGACGCTAAA
CAGTATTCGC TGGTTGTTGA TTATAAAACG CTGTCGACCA ACGGTAATAC CAATCTGCCC
GAAACGATTC TGGAAGTTGC TTATCTCTCC GGGCAGACGC TGGGCAACAA CTACTCGGCG
CTGTTTACCC CCGCCATTAC GAGCATGGCT ATTTTTCCCG GTAATGCGCA GGGGGCAGGG
CGCATCGTGC CGACGCTGGA TTTGATAAAA GCCTATGAAA CGGGTGATGC CCGTAAGGCC
GTATCCGTGA GTGATTCGGT ATCGTTGATT GGCGGGAAAA AATCCTACAG TCGATACGGG
TTGAAGTTTG TCGACTTCAA AGCGGTTGAT CCGGGCGACG GCAGTGTCTC GTTTACTGTA
CTACGCTTTG CCGATGTGTT GCTGATGTAT GCCGAAGCGC TGAACGAACA GGGTAAAACA
GCCGATGCCC TCCCTTCTCT CAATCAGGTA CGACAACGGG CTAAATTGCC TGCTTTGGCG
GGGCTTTCAC AGGCCGATTT ACGGCTGGCG CTGGAACAGG AACGGCGTGT CGAGTTCTTG
TACGAAGGCC ATCGCTGGTT CGATCTGGTC CGAACGGGGC GGGCACAAAC GGTGCTGAAT
GCCCATTACG CCAGCCAGAA ACTTAATTTT TCCGTGCAGG ATTTCGAGTT ACTGTTTCCC
ATACCGCAAG CCGAAATTGA CCTGAATCCA ACGCTAAAGC AAAACCCGGG CTATTAA
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| Protein sequence | MKKRILAILA VTATLSSCQD FLNLKPAYQI SDQGFYQNQN DFETALVGVY STTRGLYSSS
TIQYVGDLTT DNAEIQWSSP SADEMQLDQN GVTATNAYIR SVWNTCLYTI SQSSNILNRI
DAVAFDPTVK NRIKGEAQFL RAFSYFYLVR MFGNVPVATQ TFTSPAQVAA ADLTLKPKEE
VYKLIVSDLT SAETLLPATA VTDKTRASQM TVKTLLGKVY LTQKSYDLAA AKLKEVIDAK
QYSLVVDYKT LSTNGNTNLP ETILEVAYLS GQTLGNNYSA LFTPAITSMA IFPGNAQGAG
RIVPTLDLIK AYETGDARKA VSVSDSVSLI GGKKSYSRYG LKFVDFKAVD PGDGSVSFTV
LRFADVLLMY AEALNEQGKT ADALPSLNQV RQRAKLPALA GLSQADLRLA LEQERRVEFL
YEGHRWFDLV RTGRAQTVLN AHYASQKLNF SVQDFELLFP IPQAEIDLNP TLKQNPGY
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