| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4359 |
|---|
| Symbol | |
|---|
| ID | 8728119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5286914 |
|---|
| End bp | 5287258 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | Cupin 2 conserved barrel domain protein |
|---|
| Protein accession | YP_003389139 |
|---|
| Protein GI | 284039209 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGGA TAACGGCCTC CCTTCTGCAC CTTGAGCGCG AGCTAACCGC TCACGCTCAG
GGCGCAAAGC AGGTTTTTCT TCGGAACAGT GACACACCAA CCAACGTAAC GCAGGTTGCC
TACGGTGTTT TTACGAAAGC GGACTACTGC GAACTGCATA CACACCCCAC CATGGAAGAG
TGCTTTTTCT TTCTCAAAGG TGAGGGCGTT TATGTAGTCG ATGACCAGAC GATTCCGCTG
AATCACGGTG TGTTTGTCAG GATTCCGGCG GGTGTTCCGC ACCGGCTCGA AGCCACCGGC
GACGACCCAC TAGAGTATGT CTATTTCGGG GTTGCCACAA ATTGA
|
|---|
| Protein sequence | MERITASLLH LERELTAHAQ GAKQVFLRNS DTPTNVTQVA YGVFTKADYC ELHTHPTMEE
CFFFLKGEGV YVVDDQTIPL NHGVFVRIPA GVPHRLEATG DDPLEYVYFG VATN
|
|---|
| |