Gene Slin_4358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4358 
Symbol 
ID8728118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5285931 
End bp5286914 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content54% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003389138 
Protein GI284039208 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CTCTCGTCTG TGGTGCTGGC GGCTTTATTG GCGGCCACCT CGTTAATCGA 
CTCAAATCAG AAGGATACTG GGTTCGTGGA GTCGATGTTA AAGAAAATGA ATACGAAAAC
CGGAATGCCG ACGAGTTCAT CCTTGGCGAT TTAAGAGACC CGGCGGTTGC GGATGAGGTC
ATCACGTCCG ACCTGGACGA AATCTATCAA CTAGCGGCCG ATATGGGCGG TGCGGGTTTT
GTCTTTACGG GCACCAACGA CGCAGCCATC ATGCACAATT CGGTGCTTTG CAACCTTAAC
GTACTCGAAG CAGCAAAAAA TAAAGGGGTG AAACGGATTT TCTATTCGTC GTCGGCCTGC
ATGTATCCGG AGCACAACCA GATGGACCCC AACAACCCGA AATGCTCGGA AGAGTCGGCC
TACCCGGCCA ACCCCGACAG CGAGTACGGC TGGGAGAAAC TATTCTCGGA GCGGCTGTTT
CTGGCCTACC AGAAAAACCA CGGCATCGAA GCCCGCATTG CCCGTTTCCA CAACATTTTC
GGCCCACAGG GTACCTGGGA TGGCGGTCGC GAAAAAGCAC CCGCTGCCGT TTGCCGGAAA
GTGGCGATGG CCGAAGATGG CGGCTCCATC GAAATCTGGG GCGACGGCAA ACAAACCCGT
TCGTTCCTGA TTGTCGATGA GTGCGTAGAA GGTATCCGCC GGTTGATGCT GTCTGATTTC
TCGGGGCCGG TCAACATCGG GTCGGAAGAG ATGATCTCGC TGAATGACTT CGCCAAAATG
GTAATCGACA TTTCGGGCAA GAGCCTATCG ATCAACAACA TTCCGGGACC GCTGGGCGTA
CGGGGCCGCA ACTCGGATAA CCACCTGATT CAGGAGAAGC TGGGCTGGGC ACCCTCTACC
CCACTGCGCA AAGGCGTTGA AAAAACCTAC GACTGGATTT CGGAGCAGAT CCAGAAGAAA
GTTCTCGAAC CCGTCGAAGC CTGA
 
Protein sequence
MKKALVCGAG GFIGGHLVNR LKSEGYWVRG VDVKENEYEN RNADEFILGD LRDPAVADEV 
ITSDLDEIYQ LAADMGGAGF VFTGTNDAAI MHNSVLCNLN VLEAAKNKGV KRIFYSSSAC
MYPEHNQMDP NNPKCSEESA YPANPDSEYG WEKLFSERLF LAYQKNHGIE ARIARFHNIF
GPQGTWDGGR EKAPAAVCRK VAMAEDGGSI EIWGDGKQTR SFLIVDECVE GIRRLMLSDF
SGPVNIGSEE MISLNDFAKM VIDISGKSLS INNIPGPLGV RGRNSDNHLI QEKLGWAPST
PLRKGVEKTY DWISEQIQKK VLEPVEA