Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4355 |
Symbol | |
ID | 8728115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5282050 |
End bp | 5284353 |
Gene Length | 2304 bp |
Protein Length | 767 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | capsular exopolysaccharide family |
Protein accession | YP_003389135 |
Protein GI | 284039205 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.672208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.663682 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATGA ATGCAAAACC CAATCAATCG TATGTTTCCT ATCAGGTAGT CGACCCTGGC GGCTCCCCGA TCCGAAGCCA TCTGGCGCCT TACCTCCGCT ACTGGCCCTG GTTTCTTTTA TCGCTGGTGC TCTCTCTGGT TGGTGCTTAT ATCTTCCTGC TCTACAAACA GCCGGTTTAC CGCATTCAGG CGAGCCTTAT GCTCCAGGAT GAGAAAAAAG GGAGCGGCCA AACGAACCCG CTGAAAGAGC TGGAAGTGTA CTCGCCCAAG AAAGTAGTTG AAAATGAACT GGAAGTACTG CGCTCCTCTA CCCTGATGGA ACGGGTTGTC ACCAACCTCC ACCTCGATAC CCGCTACTAC CGGAAAACGT CTTTTGGCAA GCGGGAAATC TACAACGAAT CGCCGGTTTG GGTACTTGTT GAAGATGGCG ATGAAGCTTT GTACAAAAAA CCACTTACTC TATCGTTTAT CAATAACACT TCCGTTCAGA TAAATGACAA GACCTATCCA CTCAACCGAC GGATTGGAAC CCCTTACGGC CAGCTGCGTA TCCTGACCCG CAAGCCTATC AGCCCCAAAA CCGAACCCCT GATTGTACAG GCTATGCCCA CCGCAGCCGC CGTTGGCATG TACCTGGACA ATCTGAAGGC CGAACCGACC AGCAAGACAT CGACCGTTAT TCGACTGACG CTCGAAGATG CCGTTCCTAA AAAAGGCGAA GCGGTGCTGA ACAGCCTTAT CAACGAATAC AACCAGGCTT CGATCATTGA CAAAAATAAG GTGGCCGACA ACACGCTCAA ATTTGTGCAG AACCGCCTGG AGATTGTGTC GGGAGAGTTG GCAGCGGTGG AGAAAAACGT CGAAAATTAT AAATCGACGC TGGGCATTAC CGACCTGAGC GCGCAGGCGC AGTCGATCAT GCAAACGACC ACCCAGAACG ATGCACAGCT CAACCAGGTA AACATTCAGT TGGCAGCCTT GCAAGACCTG GATAAGTTTG TTACTACGCA GGCCGACAAA CGGGGCAGCA CGCCTGCTAC GGTTGGCCTG GGTGACCCCG TCCTGCTCAA CCAGATCGAT AAACTGTCGC AGCTTGAATT GCAGCGGGAT GAGTTACGGC AGACCAGTGG CGAACAGAAC CCAAAGCTTC AATCGCTCGA TCAGCAGATA AAAAATACGC AGAACAACAT TGCGCAGAAC ATCCGCACGA TGAAGTCGAT GCTCAACCGG TCGAAAGAAC AGTATGTAGC AACCAACGCC CGGCTGGAGG GCGTTATCCG GACGGTTCCC CAAAAGGAAC GGACGCTGCT CGACATTACC CGTCAGCAGA CCATCAAGAA CAACCTGTAC ACTTACCTGC TTCAGAAACG CGAAGAAATG GCCGTTACGT TTGCCGCTGC CATTGCCGAC AGCCGCACTA TCGATGCCGC CAAAAGCAGT TTGGGGCCGG TTAAGCCGGT GGGAGTCGTC ATCTATGCTT TATTCGCGCT GGTGGGGCTG CTGATTCCAA CGGCTGCCGT AGCGGGTAAA GGGGCGCTGA ACACCAAAGT ACTACGCCGA AACGATGTAG AGGATGTGAC GCAGGTACCC ATTCTGGGCG AAATCATGAG CAAGCGTAAC CGCGATGTGC TGATTGTAGC GCCCAACAAC CGCTCGGTCA TTGCCGAACA GATTCGCACC ATTCGAACCA ATCTCCACAT CGGCAAAAAC GAATCGACCG ATAGTCAGGT TCTGCTCTTT ACATCCAGCA TCAGTGGCGA AGGCAAGTCG TTCATATCGC TGAATCTGGG TGCCAGCATG GCGTTGCTGA AACAGCCTAC GGTCATTCTG GAAATGGACA TGCGCCTGCC CCGCCTGCAT CAGCATTTCG ACATCGACAA CTCGGTTGGC ATCAGCAACT ACCTCAACGG CGAAGCTACC CTGGCCGACA TTCTGAAACC GGTGCCGGGT TACCCGAATT ACTTTATTGT GCCCAGCGGC CCCCTGCCGC CCGATCCGTC CGAGCTGCTA AGCGGCCCGA ACCTGAAGCA GCTGATTGGC GAACTGCGTG AGCGGTTCCG CTACGTCATC ATCGACGCGC CACCCATTGG TATCGTTACA GATGCGCAGG CAATTGCCCC CTATTCCGAC GCTACCCTGT TTGTTGTCCG CCATGGTGTA ACGCCCAAGG AAAGCCTCAA GATTCTGGAC ATGCTCCATC GCGAACACCG TTTTCAGAAC ATGAGTATCA TTCTCAATGC CGTAGGTAGT GGAGATGGTT ACCATTTCAA CAACCGGTAC AAGAATAGTT ACTCATACCG CTAA
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Protein sequence | MSMNAKPNQS YVSYQVVDPG GSPIRSHLAP YLRYWPWFLL SLVLSLVGAY IFLLYKQPVY RIQASLMLQD EKKGSGQTNP LKELEVYSPK KVVENELEVL RSSTLMERVV TNLHLDTRYY RKTSFGKREI YNESPVWVLV EDGDEALYKK PLTLSFINNT SVQINDKTYP LNRRIGTPYG QLRILTRKPI SPKTEPLIVQ AMPTAAAVGM YLDNLKAEPT SKTSTVIRLT LEDAVPKKGE AVLNSLINEY NQASIIDKNK VADNTLKFVQ NRLEIVSGEL AAVEKNVENY KSTLGITDLS AQAQSIMQTT TQNDAQLNQV NIQLAALQDL DKFVTTQADK RGSTPATVGL GDPVLLNQID KLSQLELQRD ELRQTSGEQN PKLQSLDQQI KNTQNNIAQN IRTMKSMLNR SKEQYVATNA RLEGVIRTVP QKERTLLDIT RQQTIKNNLY TYLLQKREEM AVTFAAAIAD SRTIDAAKSS LGPVKPVGVV IYALFALVGL LIPTAAVAGK GALNTKVLRR NDVEDVTQVP ILGEIMSKRN RDVLIVAPNN RSVIAEQIRT IRTNLHIGKN ESTDSQVLLF TSSISGEGKS FISLNLGASM ALLKQPTVIL EMDMRLPRLH QHFDIDNSVG ISNYLNGEAT LADILKPVPG YPNYFIVPSG PLPPDPSELL SGPNLKQLIG ELRERFRYVI IDAPPIGIVT DAQAIAPYSD ATLFVVRHGV TPKESLKILD MLHREHRFQN MSIILNAVGS GDGYHFNNRY KNSYSYR
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