| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4319 |
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| Symbol | |
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| ID | 8728079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5229225 |
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| End bp | 5232440 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003389100 |
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| Protein GI | 284039170 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0290506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.156669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGAAT ATATACGTAG CGGTCTTCGA CTGACCGTTT GGCTGACGTT CCTGGCGAAT
GCAGCAGCGC CCATACAGGC ACAGCAATTG GCTGCTGCCC TGACCAGGCA AAAATCGTCG
GCAGCACTGG CCGCCAGCAC GAGCGCGTCG GTTCAGCTAG TAACAGGCCG CGTAACCGAC
GAAACCGGCA CGGGCTTGCC GGGTGCCAAC GTGACCGTAA AAGGCACTAC CACCGGAACC
GCCACTGACG AGAAAGGGCA GTACCGAATC AGTGTTCCAA CGCCCAATGC GGTGCTGGTC
TTTAGTTCGG TTGGCTACCT GAAGCAGGAG GTCAGCGTAG GAAACCGGAC AACGGTAGAT
ATTCAGATGC GCGTTGACAA CCAGAGTTTG AGCGAGGTTG TCGTGATCGG GTACGGCGAG
CAGTCGCGGA AAACGCTCTC CACGGCCATT GCCAAAGTAG AGGGCAAAAA TATTGGTATA
CAGCCCGTCA GTACACCCGG TGAGGCTCTG GCCGGTCTGG CGGCTGGTGT GCAGGTGCAG
TCTGACCGGG GGAGTACGCC GGGCGCACCA CCCACTATCC GTATTCGGGG AGTTGGTTCG
CTGAGTACGG GCAGCACACC GCTGTATGTC GTTGACGGCT ATCCGCTACA GGACCCCGCC
CAGTTTGCGC TCATTAATCC AACGGACATC GAGTCGATGG AAATTCTGAA AGATGCGGCT
TCGGCAGCTA TTTACGGGTC ACGGGCGGCC AACGGGGTTG TTATTGTAAC GACCAAGCGA
GGCAAAGCGG GCAAAACCAG TTTGAATGTA TCCATCTACA CAGGCATTCA GCAGCTGGCC
AAGAAAGTAC AGCTCCTGAA TCGGGATCAG TACATAGAGA ACGCCATTTA TGCCTCCAGA
CTCAAGAATA TACCTTACCC AAAAGTATTT GATACCAAAC CCGACAGTTT GCCCGATACT
GACTGGCAGG ATGCTATTTT CCGGCAGGCG GCCATCAGTA ACTACCAGAT TTCGGCCACG
GGCGGCACCG ATAAGGTTCG TTTTGCTGTC TCGGGCGGGT ATTTCAAGCA GGACGGTATC
CTGAAAGGTT CAGCCTACGA ACGGTATAAC CTGCGCTTTA ACCTGGATGC CGACTTGAGT
CCTAAACTCA AATTAGGGGT GTCGATGGCG CCTTCCTACA GCAGTCAGTT TCAGCAGCAG
GCGGCCGGGC AGTTCAACGG ATCGAACGGT ACCGAAACCA GCGGCACCCG GTCGTTACCC
AGTGCCATTA TTTCGGCCAT CGACATGCCG CCAACCATTC CGGTGTATAC GCCCAATGGC
GATTACGCGC AGACCTTCAA CGGCAACACG AACCCCAATG GTACCAATTT TTACCAGACC
AACCTCTATA ACCCGCTGGC CGTTCTGGAG CTTAGCCGCA ACAACCTGAA AGGCTATCGG
CTGTTCGGCA ATGGCTTTCT GGAATGGCAA CCGATTGCCA ACCTGCGGCT GAAAACAACG
CTGGGGTCAA CGCTGAGTAT TTTCGATCAG TCGGCCTATA TCCCGGCCAA TCTGGCCAAC
GAATCGGCTC CCCGCGCCAA CTCCACGAAC CCGGTGCTGG GTCAGATATT CGCCCGCGAG
TCGCAGACGG TGACGCTGGA CTGGCTCTGG GAAAATACCG CTACCTACAA CAAGACGTTT
GGTAACCACA ACTTCTCGCT GCTGGCCCTG TACTCGCTCC AGAAATTACA GGCTAAAAAC
ACGGCTACGT CGGGCCGGTC GGGTAGCTAC ACGACCAGTC TGCTGGATAA CCCGCTGGCC
TCGCCCGACC GGATTGGTGA GCTGAACTAC GATCAGAACG CCTTTCTGTC ATTGGGCGGA
CGGATCACCT ACGACTTCAA AAGTAAATAC ATCTTTTCGG CCGCCATTCG CCGGGATGCG
TCGTCGCGCT TCGGGCCAAA CAACCGCTTT GCTACGTTCC CATCCATCTC GGGAGCCTGG
CGGATCAGCG AAGAGAAGTT CTGGTCGGGC CTGAAGAACA GCATCAGCGA ATTCAAAATC
AGGGCCAGCT ATGGCGAAAC GGGCAATGCC AATATTGGTA GTTTCAACTG GACAAACAGC
GTACAGGGCC GGAACTACAG CTTCAATCAG GCGCGGACCT TCGGCTATGC CCAGACCGGC
TTTGCCAACT ACGACCTGAC CTGGGAGAAA AACGTGCAGA CCGACCTGGG CCTCGAAATG
GGTTTCCTGA ACGACCGATT CACCCTGGGC CTCGACTATT ACAATCGACT GACAACAGGT
ATGCTGTTCC AGAAAGATTT GCCGGGCATT GTGGGCTACG CTACTAATTT CCGAACCAAC
ATCGGCAGCC TGCGCAACCG GGGGCTTGAA CTCTCAGCCC GGGCGAACCT CACTGTAGGT
GCTGTTCGCT GGACGATAGA CGGCAATATT TCGGGCAACC GCAGCAAGGT GATGGATCTC
GGCGGTCCTT CGTCACTGCC AACGGTAGCG GCTATTTTTG GCTGGAATAA CGTCTATCAG
GTTCGCGTGG GCGACCCGCT GGGCAATATG TATGGCTATC AGGTGGTGGG TATCTTCAAA
AATGCCGATG ACCTCAGCAA GAACGCCCAG TTCACAACGG GCGACAAAGT GGGGAACTGG
ATGATTCGGG ATCAGAATGG CGATAATAAA ATCGACGAGA ACGACCGGGT GTATGTCGGC
AAAGGCGTAC CCAGCTATAT CTGGGGGATG ACCCACAGCT TTCAGTACAA AAACTTTGAC
CTGAGCGTCA TTCTTCAGGG TGTACAGGGC GTCAATGTCA TCAATGGAAA CCTGCGGCAC
ATCTGGGCAA ACCAGGTGTT CAACACCATT CCGCTTTACT TCCGGAACCA GTTCGATCCG
GCCAACCCGA CGCAAAACAC CGACTTCCCG GCGGCTGGTG CGGGGGGTAT TCACCCCGGC
AACAACCTCA CCGACCGGTT GCTTTTCGAC GGTTCGTTTG TCCGCATTCG TAACCTCACC
TTCGGCTACT CCGTACCGAC GGTTTTCCTG AACAAGATCA AGCTACAGTC GGCGCGCATC
TACGTGACGG GGCAAAATCT GTTCACCTTC ACCAGCTATC CCTGGTACAA TCCGGAGACT
AACACCGTGC CCGATTCACC CGTGCAGATT GGCGTCGATC AGGGTACCTA CCCACTGGCA
CGTACCTACA CCATTGGCCT AAATATCGGC TTCTAA
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| Protein sequence | MREYIRSGLR LTVWLTFLAN AAAPIQAQQL AAALTRQKSS AALAASTSAS VQLVTGRVTD
ETGTGLPGAN VTVKGTTTGT ATDEKGQYRI SVPTPNAVLV FSSVGYLKQE VSVGNRTTVD
IQMRVDNQSL SEVVVIGYGE QSRKTLSTAI AKVEGKNIGI QPVSTPGEAL AGLAAGVQVQ
SDRGSTPGAP PTIRIRGVGS LSTGSTPLYV VDGYPLQDPA QFALINPTDI ESMEILKDAA
SAAIYGSRAA NGVVIVTTKR GKAGKTSLNV SIYTGIQQLA KKVQLLNRDQ YIENAIYASR
LKNIPYPKVF DTKPDSLPDT DWQDAIFRQA AISNYQISAT GGTDKVRFAV SGGYFKQDGI
LKGSAYERYN LRFNLDADLS PKLKLGVSMA PSYSSQFQQQ AAGQFNGSNG TETSGTRSLP
SAIISAIDMP PTIPVYTPNG DYAQTFNGNT NPNGTNFYQT NLYNPLAVLE LSRNNLKGYR
LFGNGFLEWQ PIANLRLKTT LGSTLSIFDQ SAYIPANLAN ESAPRANSTN PVLGQIFARE
SQTVTLDWLW ENTATYNKTF GNHNFSLLAL YSLQKLQAKN TATSGRSGSY TTSLLDNPLA
SPDRIGELNY DQNAFLSLGG RITYDFKSKY IFSAAIRRDA SSRFGPNNRF ATFPSISGAW
RISEEKFWSG LKNSISEFKI RASYGETGNA NIGSFNWTNS VQGRNYSFNQ ARTFGYAQTG
FANYDLTWEK NVQTDLGLEM GFLNDRFTLG LDYYNRLTTG MLFQKDLPGI VGYATNFRTN
IGSLRNRGLE LSARANLTVG AVRWTIDGNI SGNRSKVMDL GGPSSLPTVA AIFGWNNVYQ
VRVGDPLGNM YGYQVVGIFK NADDLSKNAQ FTTGDKVGNW MIRDQNGDNK IDENDRVYVG
KGVPSYIWGM THSFQYKNFD LSVILQGVQG VNVINGNLRH IWANQVFNTI PLYFRNQFDP
ANPTQNTDFP AAGAGGIHPG NNLTDRLLFD GSFVRIRNLT FGYSVPTVFL NKIKLQSARI
YVTGQNLFTF TSYPWYNPET NTVPDSPVQI GVDQGTYPLA RTYTIGLNIG F
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