| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4313 |
|---|
| Symbol | |
|---|
| ID | 8728073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5220111 |
|---|
| End bp | 5221481 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | isocitrate dehydrogenase |
|---|
| Protein accession | YP_003389094 |
|---|
| Protein GI | 284039164 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0560117 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGTA TTACCGTAGC AAAGGGGGAT GGAATCGGCC CTGAGATCAT GAATGCCACG
CTCGCCATAT TACAGGCGGC TGGTGCCCAA CTGGAAGTAG ATGAAATACA GGTGGGCGAA
CAGGTTTATC TGGCCGGGAA TATGTCCGGT ATCTCTTCTG ATTCCTGGGA CATTATTCGG
CGCAACAAAG TGTTTCTGAA AGCACCGATC ACTACACCAC AGGGAGGTGG CTACAAAAGC
CTTAACGTAA CAATCCGAAA AATGCTGGGC CTTTATGCCA ATGTTCGGCC CTGCATAAGC
CTGCACCCGT TCGTTAAAAC CAAGCATCCG AACATGGATC TGGTGATCGT CCGCGAAAAC
GAAGAAGACT TATATGCCGG CATTGAGCAT CAGCAAACCG ACGAAGTTAT GCAATGCCTG
AAGCTGATCA GTCGGCCGGG TTGCGAAAAA ATCGTTCACT ACGCCTTTGC CTACGCCCGC
CAGTACGGTC GTAAAAAAAT TACCTGCTTC ACCAAAGACA ACATCATGAA GCAGACCGAC
GGCCTGTTTC ACCGCGTCTT CGATGAAATA GCCCCGACCT ATTCTGACAT AGAACCTGAA
CACTGGATTG TCGACATTGG GGCCGCCAAA CTGGCCGATA CCCCCGAAGC CTTCGATGTG
ATCGTGATGC CGAACCTATA CGGCGATATA CTGTCGGATG TGGCGGCTCA GATTGCCGGT
TCAGTTGGGC TGGCGGGTTC AGCCAACATT GGCGAGGAGT GCGCCATGTT CGAAGCCATT
CACGGATCGG CTCCCCGACG TGCCGGTCAA AATCTGGCGA ACCCTTCAGG GCTGTTGCAG
GGCGCGATTA TGATGCTCAA CCACATTGGT CAGGCCGAGG TGGCCGAGCG CGTACAGAAT
GCCTGGCTCA AAACCATTGA AGACGGGGTA CACACCTACG ACATCTATAA AGAGGGCATC
AGTCAGCAAA AAGTAGGCAC CAGTGAATTT GCTCAGGCAG TTATCGCCCG TCTTGGCCAG
CAACCTACAA CTCTGAAAGC CGTATCCTAT GCCAACTCAA AGGCACTCGA ATTACCAATC
TATCAGCGCA AACCAGCGGC CTCCAAAGAC CTGCTCGGTG TCGATGTGTT TGTTCACTGG
ACGGGTACTG ACCCCAATGA ACTGGCTAAC CTGGTCGGTC AGCTCGCCAC GCCCGAAGTA
CCGCTGAGCA TGATTACGAA CCGTGGCATA AAGGTGTGGC CCAATGGGTT TAAGGAAACA
TTTTGTACCG ATCACTGGCG GTGCCGTTTC CTACCCGAAA ACGGAGAGCC CATCGACAAA
AAGACCATTG TCAGGATTTT GTCGAAAGCC ACCGAGCTTA TTGATTCGTG A
|
|---|
| Protein sequence | MTRITVAKGD GIGPEIMNAT LAILQAAGAQ LEVDEIQVGE QVYLAGNMSG ISSDSWDIIR
RNKVFLKAPI TTPQGGGYKS LNVTIRKMLG LYANVRPCIS LHPFVKTKHP NMDLVIVREN
EEDLYAGIEH QQTDEVMQCL KLISRPGCEK IVHYAFAYAR QYGRKKITCF TKDNIMKQTD
GLFHRVFDEI APTYSDIEPE HWIVDIGAAK LADTPEAFDV IVMPNLYGDI LSDVAAQIAG
SVGLAGSANI GEECAMFEAI HGSAPRRAGQ NLANPSGLLQ GAIMMLNHIG QAEVAERVQN
AWLKTIEDGV HTYDIYKEGI SQQKVGTSEF AQAVIARLGQ QPTTLKAVSY ANSKALELPI
YQRKPAASKD LLGVDVFVHW TGTDPNELAN LVGQLATPEV PLSMITNRGI KVWPNGFKET
FCTDHWRCRF LPENGEPIDK KTIVRILSKA TELIDS
|
|---|
| |