Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4306 |
Symbol | |
ID | 8728066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5209574 |
End bp | 5210890 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389087 |
Protein GI | 284039157 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0625016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00220022 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGGCAGCG AGCGTCTGGC CCAACGGTTG CTCAACAACT CGGTAGAGTA CATCGAGGTA TCAGCCAATG CCACCAAAAA AGTCGAGCAG GCCCTGATTA AGAATGCCGA CGACGAAATC CAGAGCATCA CCGAAGAAGT TGAAGATGCC ACGGGTAAAA AGACCACCAT CAAAATCTGC GGCTTCTGTC TGGCAGGTCA AACCCCGGTG TTTGGTAGTG GCCAATCGCT GGCCGAGATG GCAGCGTCGC AGCCGGTGCA GACCCTGGAA CGGGATGGGT CGGTAGGCTG GCGTAAGCTG CTGGGCAAAG TAGCCGACCG GGTCGAGGGG CTAGTACGTA TATGGGTAAG GGGTGAAGCG GTAAGCAGTG CCCCCGAACA TGATTTTCTG ACCCAGACGG GCAAGCGCCC TGCGCGTTCG TTGGTGAGTG GTATGTTGGT CTACAGCCTG TTAACGGGCG GTTGGTTGCC GGTGGATTCT GTTTCGTATG CGGCTACCCC CACCCAGGTG GAGGGGTTGG TACTGGGCGA TGTAGTAGGC TATGGAGTAG GTCGCTGGGG ACTGGTCGTG AGTGACTCCC GGCGGTGTCC TAAGCGGGTA CGGACGACCA ACGAAGCCCT CGATCAGTTG GAGAATGTGC TGGGTAATCG GTATAACGAA CTGGTCGATC TATTGGATCA GTTACCCAAC AGGAAGTATA CGCTTCAGAA AGTGGATGGC CAGCTAAAAC TGATTGACGA GGGAGGCACC GTGTGGCTGG ATGAGATTAG TGCTACCCAG TTCAAAGCGC GGGGTGGCAC TAATCCCTGG AATCAGTTTC TAGATGTGAC TCCACCGTTG ATGAAGAATT TTGAGTATGT GGTGGATAAC AATTTCATTT ACAAAACAGA CGATGCGGGT CGAGTGAGTA AGATTACGGT TGAGGATTTA CAAACCAATC AGGCTCGTCC CCGTAATACG TATCAGCAGC AGAAAGCGAA GGACATCAAA GATGGCAAAA CCACAGACTC AATTGACCCC ACTGATGATG GGGGGCACAT GGTGGCCTCT CAGTTTTATG GCCCCAGTGA GCAGATCAAC TATTTCCCCC AGAATGCGGT TCAGAATCGA GCAGGTGGTG ATTGGTATAT TATGGAGCAA GAATTGAAGC AGTTACGAAT CAACAATCCT AATGCTGTTA TTAAAGTGGA AATAACCCCA GTTTTTGATG ATGGGATTAT AAAGCGACCC TCCGACTTTG ATGTAAGAGT AACTGTTACT GAGAACGGTA TACCTGTTAC CATTACCAAA CCTCGATATA ATATTTCTAA TCTCTAA
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Protein sequence | MGSERLAQRL LNNSVEYIEV SANATKKVEQ ALIKNADDEI QSITEEVEDA TGKKTTIKIC GFCLAGQTPV FGSGQSLAEM AASQPVQTLE RDGSVGWRKL LGKVADRVEG LVRIWVRGEA VSSAPEHDFL TQTGKRPARS LVSGMLVYSL LTGGWLPVDS VSYAATPTQV EGLVLGDVVG YGVGRWGLVV SDSRRCPKRV RTTNEALDQL ENVLGNRYNE LVDLLDQLPN RKYTLQKVDG QLKLIDEGGT VWLDEISATQ FKARGGTNPW NQFLDVTPPL MKNFEYVVDN NFIYKTDDAG RVSKITVEDL QTNQARPRNT YQQQKAKDIK DGKTTDSIDP TDDGGHMVAS QFYGPSEQIN YFPQNAVQNR AGGDWYIMEQ ELKQLRINNP NAVIKVEITP VFDDGIIKRP SDFDVRVTVT ENGIPVTITK PRYNISNL
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