Gene Slin_4306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4306 
Symbol 
ID8728066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5209574 
End bp5210890 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389087 
Protein GI284039157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0625016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00220022 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGGCAGCG AGCGTCTGGC CCAACGGTTG CTCAACAACT CGGTAGAGTA CATCGAGGTA 
TCAGCCAATG CCACCAAAAA AGTCGAGCAG GCCCTGATTA AGAATGCCGA CGACGAAATC
CAGAGCATCA CCGAAGAAGT TGAAGATGCC ACGGGTAAAA AGACCACCAT CAAAATCTGC
GGCTTCTGTC TGGCAGGTCA AACCCCGGTG TTTGGTAGTG GCCAATCGCT GGCCGAGATG
GCAGCGTCGC AGCCGGTGCA GACCCTGGAA CGGGATGGGT CGGTAGGCTG GCGTAAGCTG
CTGGGCAAAG TAGCCGACCG GGTCGAGGGG CTAGTACGTA TATGGGTAAG GGGTGAAGCG
GTAAGCAGTG CCCCCGAACA TGATTTTCTG ACCCAGACGG GCAAGCGCCC TGCGCGTTCG
TTGGTGAGTG GTATGTTGGT CTACAGCCTG TTAACGGGCG GTTGGTTGCC GGTGGATTCT
GTTTCGTATG CGGCTACCCC CACCCAGGTG GAGGGGTTGG TACTGGGCGA TGTAGTAGGC
TATGGAGTAG GTCGCTGGGG ACTGGTCGTG AGTGACTCCC GGCGGTGTCC TAAGCGGGTA
CGGACGACCA ACGAAGCCCT CGATCAGTTG GAGAATGTGC TGGGTAATCG GTATAACGAA
CTGGTCGATC TATTGGATCA GTTACCCAAC AGGAAGTATA CGCTTCAGAA AGTGGATGGC
CAGCTAAAAC TGATTGACGA GGGAGGCACC GTGTGGCTGG ATGAGATTAG TGCTACCCAG
TTCAAAGCGC GGGGTGGCAC TAATCCCTGG AATCAGTTTC TAGATGTGAC TCCACCGTTG
ATGAAGAATT TTGAGTATGT GGTGGATAAC AATTTCATTT ACAAAACAGA CGATGCGGGT
CGAGTGAGTA AGATTACGGT TGAGGATTTA CAAACCAATC AGGCTCGTCC CCGTAATACG
TATCAGCAGC AGAAAGCGAA GGACATCAAA GATGGCAAAA CCACAGACTC AATTGACCCC
ACTGATGATG GGGGGCACAT GGTGGCCTCT CAGTTTTATG GCCCCAGTGA GCAGATCAAC
TATTTCCCCC AGAATGCGGT TCAGAATCGA GCAGGTGGTG ATTGGTATAT TATGGAGCAA
GAATTGAAGC AGTTACGAAT CAACAATCCT AATGCTGTTA TTAAAGTGGA AATAACCCCA
GTTTTTGATG ATGGGATTAT AAAGCGACCC TCCGACTTTG ATGTAAGAGT AACTGTTACT
GAGAACGGTA TACCTGTTAC CATTACCAAA CCTCGATATA ATATTTCTAA TCTCTAA
 
Protein sequence
MGSERLAQRL LNNSVEYIEV SANATKKVEQ ALIKNADDEI QSITEEVEDA TGKKTTIKIC 
GFCLAGQTPV FGSGQSLAEM AASQPVQTLE RDGSVGWRKL LGKVADRVEG LVRIWVRGEA
VSSAPEHDFL TQTGKRPARS LVSGMLVYSL LTGGWLPVDS VSYAATPTQV EGLVLGDVVG
YGVGRWGLVV SDSRRCPKRV RTTNEALDQL ENVLGNRYNE LVDLLDQLPN RKYTLQKVDG
QLKLIDEGGT VWLDEISATQ FKARGGTNPW NQFLDVTPPL MKNFEYVVDN NFIYKTDDAG
RVSKITVEDL QTNQARPRNT YQQQKAKDIK DGKTTDSIDP TDDGGHMVAS QFYGPSEQIN
YFPQNAVQNR AGGDWYIMEQ ELKQLRINNP NAVIKVEITP VFDDGIIKRP SDFDVRVTVT
ENGIPVTITK PRYNISNL