| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4301 |
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| Symbol | |
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| ID | 8728061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5196848 |
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| End bp | 5202247 |
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| Gene Length | 5400 bp |
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| Protein Length | 1799 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | Fibronectin type III domain protein |
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| Protein accession | YP_003389082 |
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| Protein GI | 284039152 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.130951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00087761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGTTGAGGT CCCAACGGCT GGCCGACTAC TTCTCCGCCG ATAAACGACT CCTCGTCGAC
CTGCTCCTCA AAGACCTCAC CAAACCCGCC ATCCAGGTCT ACCTCCGCTG GAGCTTCGAA
GGCGTCGGCA TCCGCGTCGG CTCCCAACCC GGCTATGTAC CACCCCACTT CATCACCCTA
CAGCCCGGCA TCCTCAACCG ACAACGCGGC AGTGACCTCC AGGCCGACTA CTTCAACCCG
GCCGCCATCC AAACCCAGGG CATCGACCCC CGCTCGGCCT ACACCATCCA ACTGCCCGAA
GGCTTTTATA CCCTCAACCT CGAAGCCCTC GAAGCCAGCA CCGGCCAGAT CGTCTCCAAC
ACCAGCCAGA CCTTCCTGGT GCTCACCTAC CCCCAGCCGC CCCTGCTCAA CCTCCCCCTG
ACGGGCAGTG AACTCTCCCC CACAGCCCTC CAGAAAGTAC CCATCAGCTG GTCGCCCCGC
CACTTTGCCA CCCCCACCAC CAACGCCGTC TATACCCTCA AGGTCTGTGA AGTGCCCGAG
GGCTTCGAAC CCAACGAGCA GGTGATGCTC ACCTGCACCG AGCCCCGGCT CGAGATGACC
ATCCCCGCCA CCACCACCGC CCCCGACATC ACCCAATGGA TCAAACCCCT GGAAGTGGGC
CACCGCTACG CCTTCCAGGT GAGTGTCACC GACCTGAGCG GGGAAATGAC CAACTTTGTC
AATCAGGGCC GCTCCCAGGT GAGCTACTTC CGCTACGGCA AGGAATGCCG GCCACCGGCC
TTCACTATCC AGTCCCTGGG TTCGGACCGG GTGCAGCTGA GCTGGGAGCG GACCGAAGGG
GCTCAAGGCT ATGTGGTGGA GTACAAGCTG GCTACCGCCC CCGACTGGCA AACGCTGTCG
GCCACCGGTA CGGCTCAGGT GATTGGAGGG CTAAAGCCTA CGGCCGATTA CCTGTTTCGG
ATGCGTGCGG ACTGCGGGGG CTCGGCCCCC TCGGCACCCG GTGAGATCCA GCCCTGGAAC
ATCCGGGATG AAGCGCCGGA TGTGGCCCCT GAATTGCCCC TGACGCTGAC CAATCCCATC
GCCATCCGGG TGCAGAACGG CCCCGATGGA CAGGCCCAGC TACCCACCAG CTTATCAGCC
CTCTACCGCA ATTATCCTAG CCCGAGCGCC CCCAGCCCGG GCACTACCTC ACGGCCCGCG
GGGAGTAATC CCACCCCCGG TACCCAACCA ACGACCACCG GTGCAGTATC GACCACGGAC
ACCGGAGGGA CGGGGACAGG GCAAGCGACC AGCAGCCCTA CTCCCGCAGA CGCGGCCCTG
CTCACCCTGC CCTACTGCGC CATGCAGGCC AGCAGCTTTG CGGGCTGCGA GGTGCCTCAC
CCCAGCGTGG CCCTGCCCAC CGGGGAGAAA GAGCTGACCA GCCTGCAGGT GGGCGATGTG
CTGGGTATAT ATGATTATGC CGTCTTTGTG ACGAAAGTAG GCCGAGATGC GCCCCTCTCG
GGGGAAGGGC TGGCCCGGCT GCCGTTTCTG GGCGGGACGA TGGTGCTGGT GGAGTTCTCG
GGCGTATCGG CCCGGGCGGG GGAGGACGGC ACCAACGGGG GCTGCGTGTA TCAGCTTGCC
CCTTCGGGCT TCTTTCGCAT CAAGCGGACC ACCCAGGCTC AGGTATTGGC CACCCAGCAG
GGCCTCATCC GGCAGGTGCT GGTGCAGCAC TCGGGCAATC CAGCTGATTC GACCCGTGGC
GGTCCGTTTG TGGGTACTTT GGGCGAAGCC CTGGCGAAGT ACGATTCGGT GCTGGTGAGT
TTAGGCAGTC CGCAACAACA GCCGCTGAGT GCAGCCACCC GGCAATCGCT CATTCAGTAT
CTGGCGGCTG TGGCCCAGGG GAGCGAGTCG ATCCGGAATT CGTTCGATGC GGTCTACGGA
GGGAGTCAGG AGCGGCTGGT GGTGAGTATT CGTGACAGTC TGGCCCAGTT GATGGGTCAG
GTTAGGGCCA GTTTGACAGC GGTGCAGAGC GGCTCTTCGG TGGCTGGTTT GGGGCTGTTG
GCGGCTCGCT ATGCGGCTTT GTTTGCGCAG CTGGGGCAGT TGACCAGTCC TGCCATGACT
ATACCGGTCA GTCCGTCGCT GAGCCCGGTG GTGTTGAGTA GCCTTACTGA TACCAGCGTA
AAGCTGAGCT GGCAGGGCGA CCCTTCCTTT AGCCGGTATG TAGTGCATTA CCAACTGGAA
GGTGGGGGCG AACTGCTGCA AACGGTGACG GGCACCAGCA TTCAACTGCT AAATCTGAAA
GCAGGCAGTA ATTATAATTA CACCATTGAA GCCTATCAGG GAGCTCAACT CGCAACAACC
TATCAAGCTG CTTTTTTGAC CCTTTCCCAA ACAGTACCTG TCCCACAACA TTTGGCTTAC
ACCATACAGG ACGATCATAC CGTCACGCTT ACCTGGGATA AGAACAAAGC CATTCAGAGT
TACAAACTGG TTTATACCGA TCAGGCTGGG GTGGAGCGAA CCGTTTATCC CACCATGAAT
CAGGTGCAAT TAACTGGGCT TGACCCGACC CAACAGTACA CCTACCAGTT AGTCGCTTAT
TCAAGTGCAC ATGTGAGTAG TGAGCCCGTA GGTGGACGAC TGGCTACCGC ACCCGCTTGC
AATCTGGAAA TACGAGTTTA TGATTCGAAA AATCAAGTTT TTGTTCCTCA GGGTGAAACC
TGGCTTTTAC CATTTGGATG TAATGGAGGA ATAACTACCT GGTCGAATGG CACCGTCCAG
GTAAAAGATG ATGGACAGAC TGTTACGTGG GCAGACGGCG AAATCGCTAC CATCAATTAT
AGTTTTATTG AGCACTGGCT TGTAGTAAAA CCTAAAAAAA ATACTACTTA TACCGTCATC
TGTCAAATGG GTGCTGGCAG TAATCAAAAG AACTGTACGT ACAGTGTAAA TGTGTTAGTG
ACTGACCCGA ATTGTACTTC TTTCCAGATA TCGGCTTCAA AACAAATTTT TGATCAGGGA
GACGCCATCC AGCTTACAGC TACAGGATGT AAAGGGCAAG TTATTTGGGG TAAGGGATTA
GGGACTGGCT CTTCCATACA GTTTTACCCG CGCAATGACA TAATCATTTA TGCTACCTGT
CTGGATGGAC CCATATCGTG TCAATCAAAT ACGATTTCTC TTACACTAAA GGCGTGTACT
TATTCCCTTT TTGTGTCTAA CTCAAACGCT ACGAGTGGTA AACAAGCTAC TGTTAGTGTA
CTTGGATGTC AAGGGGGGAG TGTAAAATGG TCTTTTAAGG GAAATGCAAC AAGTAAGGAG
CGCACTTATA CGGATAATCT AACGCAGGAA AGTCGCTTTG ATTACCAGCT ATATAATATA
CAGGGTGATA TTATGGTAAC AGCAACCTGT ACACCACAGG GTAAAACGGC CTGTCCACCA
ATAACTATTG CGGTAAAGGA ACCTCAGGTA GCCTGCGATA ACAATAACCT TCTTTTGTCC
AGTGCAACGG CGAGCGGCTA TCCAGGGCAA TGGTTTATCC TCTCCCAGAA CAGCAATACG
TTTATACTTA CCGATGAGAC TGGGACCAAG CTAAATGCTG TGCCGACCAA ACAACTGCGT
GTTCCTTCTA GCAATAAAGA CAATATATAT AAAGCCACAT TTGCTAACGG ATGCACCAAA
AATATTCGTA TTCCAGCACA ACTATATTCC ATTTCATGGA CACCATTCAC GATAGGCAGT
ACACCTGCTG GTGATTCATA TTATGCCGAA GACGAATTTT CCCTTATCAA TTCAGGGAAG
TTTTCCCTTG GCTTTCAGCT TTTGGATTGC CCCGGTAAAG TCGTATTTCA ATCGAGTAGC
CAACCATTAA CGCCAATTGA AGCATCGACA GTTTACCTAA CGAAAGATCA CACAAAAAAT
CCAAGTCCCT CAAATATTTA TGCGAACCAA GCCTACTTGC CTTTCCCGAA CCAATCAACA
ACATATTATG CCTCTTGTCA ACTGACAAAT CCTGATGGTT CTACTACGGT TTATCCGGCT
CGAAATTCAA AGACAGTGAT TGTGCCTTCC GACAATTGCA TGAGCATTGA TCAAACGGAA
ATTCAGGTAT CGACGGGACA GCAGGTGGTT TTTACCGCAA AAGGATGCCT AGGCTCTGTG
GTTTGGTCGT CAACGGGGCT GGCCTCGGTG ACTGGAAATA CATTTACCGC TACTCCCTTT
GTGCCTTTCG GAAGTATAAA TCCCATTGTT AACTATCAGG CAACTTGTAG CCAGCCCGTC
TGTACTCAAA CCGTTTCAGT GTATGTTGAC CCTTGCCGCT TTTTCATAAA AGCCACTTCT
AAACAAGTTA AAATTGGTGA CGAAGTCCCC CTTACGGCTA CAGGATGTTC AGGCGGAACC
GTTGAGTGGA AGACTGGCGA TGTGGGTAGC CAGATAACGA AAAAACCCCT GGAGAAGACC
CTGTATGAAG CTATTTGCGT GGTTAATCAG GTGCCTACTT GCTCAGCTCA GGTGGAAGTA
ACGGTCGATA ATCAATCCCC GGGGCCCATT GACTGCCCAA AGCTGGTTTT AACCCCTGAC
AAGAGTAAAT ATATTCGCTG CGGAGATGGA GCCGTGACGA TCACAGCTTC GGGTTGTCAG
GCAGGCAGCC AAGTTACCTG GGAAGGAAAA ATAACGCAGG ATATTAGTCT GCCATACAAG
ACGACCGTTC AGCAAGACCG AACCATCTCG GCTATATGTC TAACACCTTA TAAACTTTCG
TCGTCGACTC AGATTACTAT TCATTTAACG GAACCAGATT TATTCATTTC TCCTAACCCG
ACAGAAGTAT ATGCTGGTGT ATCGACGGTA CTACGAGCTT CAGGCTGTTA TGCGTCTGAT
TGCAAAGAGG GTAGCTATAC ATGGAGAAAC TTAGCTTCCA ATGAAGTTCA TTATGGGTCA
AGTATAACAA TCACACCGCT GGCGGAAATG AACTATCGGG TAACTTGCTC AAGCGGAACA
ATTCAGGAGG TGACTGTTTC ACTTAAAGAC CCAGACTGCC CCAACCCACC ACAAAACACA
ATATATACTT CTACACAGGC CCAGATAGGT GTAGAGAAGT GTGATGGCAA TTATGAAATC
AAATGGATAA AATCACTATC TGCGCCCCCT TATATAACGC AGGTTGCACA AAATAAGAAA
CGAATCTGGG TGCCTATTCC TTCATCTAAT GGTGGCTTAA CAATTTATGA CACCTACTTA
TGTTATTGTG TGGTCGACGG TGTACCCTGT ATATTTAATC GTTCTGTTTC TTCAGATCTA
CGAAACGATG GCAGTAGTGG CTCTGGAGAT ACTTCAACTC CTTCAACTAA TCCTGACCCT
TGCAATACGT TTGCTTTTAC AGATAAAGGT TATAAGGGTG TGTATTTCGG AGTAAACTGA
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| Protein sequence | MLRSQRLADY FSADKRLLVD LLLKDLTKPA IQVYLRWSFE GVGIRVGSQP GYVPPHFITL
QPGILNRQRG SDLQADYFNP AAIQTQGIDP RSAYTIQLPE GFYTLNLEAL EASTGQIVSN
TSQTFLVLTY PQPPLLNLPL TGSELSPTAL QKVPISWSPR HFATPTTNAV YTLKVCEVPE
GFEPNEQVML TCTEPRLEMT IPATTTAPDI TQWIKPLEVG HRYAFQVSVT DLSGEMTNFV
NQGRSQVSYF RYGKECRPPA FTIQSLGSDR VQLSWERTEG AQGYVVEYKL ATAPDWQTLS
ATGTAQVIGG LKPTADYLFR MRADCGGSAP SAPGEIQPWN IRDEAPDVAP ELPLTLTNPI
AIRVQNGPDG QAQLPTSLSA LYRNYPSPSA PSPGTTSRPA GSNPTPGTQP TTTGAVSTTD
TGGTGTGQAT SSPTPADAAL LTLPYCAMQA SSFAGCEVPH PSVALPTGEK ELTSLQVGDV
LGIYDYAVFV TKVGRDAPLS GEGLARLPFL GGTMVLVEFS GVSARAGEDG TNGGCVYQLA
PSGFFRIKRT TQAQVLATQQ GLIRQVLVQH SGNPADSTRG GPFVGTLGEA LAKYDSVLVS
LGSPQQQPLS AATRQSLIQY LAAVAQGSES IRNSFDAVYG GSQERLVVSI RDSLAQLMGQ
VRASLTAVQS GSSVAGLGLL AARYAALFAQ LGQLTSPAMT IPVSPSLSPV VLSSLTDTSV
KLSWQGDPSF SRYVVHYQLE GGGELLQTVT GTSIQLLNLK AGSNYNYTIE AYQGAQLATT
YQAAFLTLSQ TVPVPQHLAY TIQDDHTVTL TWDKNKAIQS YKLVYTDQAG VERTVYPTMN
QVQLTGLDPT QQYTYQLVAY SSAHVSSEPV GGRLATAPAC NLEIRVYDSK NQVFVPQGET
WLLPFGCNGG ITTWSNGTVQ VKDDGQTVTW ADGEIATINY SFIEHWLVVK PKKNTTYTVI
CQMGAGSNQK NCTYSVNVLV TDPNCTSFQI SASKQIFDQG DAIQLTATGC KGQVIWGKGL
GTGSSIQFYP RNDIIIYATC LDGPISCQSN TISLTLKACT YSLFVSNSNA TSGKQATVSV
LGCQGGSVKW SFKGNATSKE RTYTDNLTQE SRFDYQLYNI QGDIMVTATC TPQGKTACPP
ITIAVKEPQV ACDNNNLLLS SATASGYPGQ WFILSQNSNT FILTDETGTK LNAVPTKQLR
VPSSNKDNIY KATFANGCTK NIRIPAQLYS ISWTPFTIGS TPAGDSYYAE DEFSLINSGK
FSLGFQLLDC PGKVVFQSSS QPLTPIEAST VYLTKDHTKN PSPSNIYANQ AYLPFPNQST
TYYASCQLTN PDGSTTVYPA RNSKTVIVPS DNCMSIDQTE IQVSTGQQVV FTAKGCLGSV
VWSSTGLASV TGNTFTATPF VPFGSINPIV NYQATCSQPV CTQTVSVYVD PCRFFIKATS
KQVKIGDEVP LTATGCSGGT VEWKTGDVGS QITKKPLEKT LYEAICVVNQ VPTCSAQVEV
TVDNQSPGPI DCPKLVLTPD KSKYIRCGDG AVTITASGCQ AGSQVTWEGK ITQDISLPYK
TTVQQDRTIS AICLTPYKLS SSTQITIHLT EPDLFISPNP TEVYAGVSTV LRASGCYASD
CKEGSYTWRN LASNEVHYGS SITITPLAEM NYRVTCSSGT IQEVTVSLKD PDCPNPPQNT
IYTSTQAQIG VEKCDGNYEI KWIKSLSAPP YITQVAQNKK RIWVPIPSSN GGLTIYDTYL
CYCVVDGVPC IFNRSVSSDL RNDGSSGSGD TSTPSTNPDP CNTFAFTDKG YKGVYFGVN
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