Gene Slin_4298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4298 
Symbol 
ID8728058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5194194 
End bp5194676 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content30% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389079 
Protein GI284039149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000161377 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00151279 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGAGA AGATAGATAC AACAACAATA GATGGCTATA TTAACCAGTT AAATTCCTAT 
TCTACTACCA AGAAGTTGGT AACATGGATT TTAACTGGTA ATATAGATAA GGTAATATTA
GGTGAAGAAC CTTTTTCTGT AGCGACCAGA TGGGATAATT CACCAGTAAA TCCGAGTCAA
ATGATGTGGA TTTTTTATAT GCTTTTAAGG GATGGGGAAA TTACAAATGA TCAGATAAAT
GAGGCTTTCT CACGAGTGCA AATCAAGAGC AATAGTTTCA ATGTCTGTTT AATATTAGAT
TATTGTTTTA GTTATATTAT TTTTTTAAAG AAAGTAGATG ATTTACTAAA AATAGATTTT
GCAAATTTCA TTAAACAAAT TAATGAAGAT ATATACACAT ATAAAAGCCA ACCTTGTGTA
AGGTATTTGA CTCAAAAAAT CAATGAAGAA AGCGTAGAGA AAATATTTCC TGATTTGGCA
TAG
 
Protein sequence
MSEKIDTTTI DGYINQLNSY STTKKLVTWI LTGNIDKVIL GEEPFSVATR WDNSPVNPSQ 
MMWIFYMLLR DGEITNDQIN EAFSRVQIKS NSFNVCLILD YCFSYIIFLK KVDDLLKIDF
ANFIKQINED IYTYKSQPCV RYLTQKINEE SVEKIFPDLA