Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4298 |
Symbol | |
ID | 8728058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5194194 |
End bp | 5194676 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389079 |
Protein GI | 284039149 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000161377 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00151279 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGAGA AGATAGATAC AACAACAATA GATGGCTATA TTAACCAGTT AAATTCCTAT TCTACTACCA AGAAGTTGGT AACATGGATT TTAACTGGTA ATATAGATAA GGTAATATTA GGTGAAGAAC CTTTTTCTGT AGCGACCAGA TGGGATAATT CACCAGTAAA TCCGAGTCAA ATGATGTGGA TTTTTTATAT GCTTTTAAGG GATGGGGAAA TTACAAATGA TCAGATAAAT GAGGCTTTCT CACGAGTGCA AATCAAGAGC AATAGTTTCA ATGTCTGTTT AATATTAGAT TATTGTTTTA GTTATATTAT TTTTTTAAAG AAAGTAGATG ATTTACTAAA AATAGATTTT GCAAATTTCA TTAAACAAAT TAATGAAGAT ATATACACAT ATAAAAGCCA ACCTTGTGTA AGGTATTTGA CTCAAAAAAT CAATGAAGAA AGCGTAGAGA AAATATTTCC TGATTTGGCA TAG
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Protein sequence | MSEKIDTTTI DGYINQLNSY STTKKLVTWI LTGNIDKVIL GEEPFSVATR WDNSPVNPSQ MMWIFYMLLR DGEITNDQIN EAFSRVQIKS NSFNVCLILD YCFSYIIFLK KVDDLLKIDF ANFIKQINED IYTYKSQPCV RYLTQKINEE SVEKIFPDLA
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