Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4291 |
Symbol | |
ID | 8728051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5182421 |
End bp | 5190232 |
Gene Length | 7812 bp |
Protein Length | 2603 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | Fibronectin type III domain protein |
Protein accession | YP_003389072 |
Protein GI | 284039142 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.118645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGTT TCTACCAAGC CTTGTCTTTG TTTGTTACGG GTACCCTCCG GTGCCGATGG TCTATACTGC TGGTCCTTTC CCTGATGAGT CAACGGAATG TAGCCCAGTC GATCCAGAAC TACCCCGTCC ATACCTCGGC CTACTTCGTC GGACCGCCCT CCCAACGGCT GGCCGACTAC TTCTCGGCCG ATAAACGACT CCTCGTCGAC CTGCTCCTCA AAGACCTCAC CAAACCCGCC ATCCAGGTCT ACCTCCGCTG GAGCCTCGAA GGCGTCGGCA TCCGCGTGGG CTCCCAACCC GGTTATGTCC CCCCTCACTT CATCACCCTC CAGCCGGGCA TCCTCAACCG ACAACGCGGC AGTGACCTCC AGGCCGACTA CTTCAACCCG GCCGCCATCC AAACCCAGGG CATCGACCCC CGCTCGGCCT ACACCATCCA ACTGCCCGAA GGCTTTTATA CCCTCAACCT CGAAGCTCTC GAAGCCAGCA CCGGCCAGAT CGTCTCCAAC ACCAGCCAGA CCTTCCTGGT GCTCACCTAC CCCCAGCCGC CCCTGCTCAA CCTCCCCCTG ACGGGCAGTG AACTCTCCCC CACAGCCCTC CAGAAAGTAC CCATCAGCTG GTCGCCCCGC CACTTTGCCA CCCCCACCAC CAACGCCGTC TATACCCTCA AGGTCTGTGA AGTGCCCGAG GGCTTCGAAC CCAACGAGCA GGTGATGCTC ACCTGCACCG AGCCCCGGCT CGAGATGACC ATTCCGGCCA CCACCACCGC CCCCGACATC ACCCAGTGGA TCAAACCCCT GGAGGTGGGC CACCGCTACG CCTTCCAGGT GAGTGTCACC GACCTGAGCG GGGAGATGAC CAACTTTGTC AACCAGGGCC GCTCCCAGGT GAGCTACTTC CGCTACGGCA AGGAATGCCG GCCACCGGCC TTCACTATCC AGTCCCTGGG CTCGGACCGG GTGCAGTTGA GCTGGGAGCG GACCGAAGGG GCGCAGGGCT ATGTGGTGGA GTACAAGCTG GCCACCGCCC CCGACTGGCA AACGTTGTCG GCCACGGGTA CGGCTCAGGT GATTGGGGGG CTAAAGCCCA CGGCCGATTA CCTGTTTCGG ATGCGCTCGG ACTGCGGGGG CTCGGCCCCC TCGGCACCCG GTGAAATCCA GACCTGGAAC ATCCGGGATG AAGCCCCCGA TACCCCCCTT CAACTACCCC TGACGCTGAC CAATCCCATC GCCATCCGGG TGCAGACCGG CCCCGATGGA CAGGCCCAGC TACCCACCAG CTTATCAGCC CTCTACCGCA ATTATCCTAG CCCGAGCGCC CCCAGCCCGG GCACTACCTC ACCGCCCGCG GGGAGTAATC CCACTCCCGG TAGCCAACCA ACGACCACTG GTGCAGTATC GACCACGGAC ACCGGAGGGA CGGGGCAAGC GACCAGCAGC CCTACTCCCG CAGACGCGGC CCTGCTCACC CTGCCCTACT GCGCCATGCA GGCCAGCAGC TTTGCGGGCT GCGAGGTGCC TCACCCCAGC GTGGCCCTGC CCACCGGGGA GAAAGAGCTG ACCAGCCTGC AGGTGGGCGA TGTGCTGGGT ATATATGATT ATGCCGTCTT TGTCACCCGG GTGGGGGGCG GTTCACCCCT CTCGGGGGAA GGGCTGGCCC GACTGCCGTT TCTGGGCGGG ACGATGGTGC TGGTGGAGTT CTCGGGCGTA TCGGCCCGGG CGGGGGAGGA CGGCACCAAC GGGGGCTGCG TGTATCAGCT TGCCCCTTCG GGCTTCTTTC GCATCAAGCG GACCACCCAG GCCCAGGTAT TGGCCGCCCA GCAGGGCCTC ATCCGGCAGG TGCTGGTGCA GCACTCGGGC AATCCAGCTG ATTCGACCCG TGGCAATCCG TTTGTGGGCA CTTTGGGCGA AGCCCTGGCG AAGTACGATT CGGTGGTGGT GAGTTTGGGC ACTCCCCAGC GTCAGACCCT GAGTGCCGCC ACCCGGCAAT CGCTCATTCA GTATCTGGCG GCTGTGGCCC AGGGGAGCGA GTCGATCCGG AATTCGTTCG ATGCGGTCTA CGGAGGGAGT CAGGAGCGGC TGGTGGTGAG TATTCGTGAC AGTCTGGCCC AGTTGATGGG TCAGGTTAGG GCCAGTTTGA CAGCGGTGCA GAGCGGCTCT TCGGGGGCTG ATTTAGAGCA GCTGGCCGCT CGCTATGAGG CCCTGTTTGC GCAGCTGGGG CAGTTGACCA GTCCCAGCCA TCCAACGCCG GTCAGTCCGT CGCTGAGCCC GGTGGTGTTG AGTCAGCTCA CCGACACCAG CGTGAAGCTG AGCTGGCAGG GTGACCCCAG CTTTAGCCGG TATGTAGTGC ATTACCAGCT GGAAGGTGGG GGTGAACTGC TGCAAACGGT GACGGGCACC AATATTCAAC TGGTAAATCT GAAAGCAGGC AGTAATTATA ATTACACCAT TGAGGGGTAC AAGGGCACGG AATTGGTCAG TAGGTACGGA GGCACTCCTT TTACGACCTT GACTAAAACC ATACCAGCTC CTCAGAACCT GACTTATGCC GTGGTCGATG ACCATAGAGT CAAACTGAGT TGGGATAAGA ACAGCCAGCA TGTAAGCTAC AAGCTGGTTT ATACCGATGC CACAGGCGAG CAGCGCACGG TGTATCCCAC CACCAATCAG GTTAAGCTGA CGGGCTTAGC CACCAATCAG GCTTACACGT ATGCGGTGAT GGCCTATGGG AGTGGCTCGC TGGTGAGTGA TGGGGCTACG AGCAATTTCC AGTTGGGAAC GGTCTGTTAT GCCACCATGC AAGCCTCCGC CGAACGGGTG ATAGCCGGTA CGGAGGTGAC CTTGACGGTG AGTAGCTGCC GGGATAAAGA GGGTAATCCG GGGATGGTGA TCTGGACGGG CAAGGGTTTA CCCCAGACCT TTGGCACCAC GCAGGTTTTC CGCCCCAGCG AAACGGCCAC CTATACCAGC TCTTGCCGGT TGATGGTGGA CAATGGCAAT GGGCCAGAGC CGGTAAGTTG CTCGGATAGC AAGACAATTA CAGTTGATAA GGCCTGTACG GGGGTTATTG CAACAGTAAG CCCAAAAACG GTTGATCAGT ATCAACCGAT TGTACTACAA GCAACGGGCT GTGCCAGTAA TATTCGCTGG GGGGTGGGCT ATCCAACCGA TGCAGGCGTC GTCAGTACCC AGCAGGCAGC CATCATCTAT CCAACGACCA GCCAGAATAA AGCCCAAATC TATACGCTAG CCTGTAAAGA CCAAACCGGC ACCACCTGTC TGGTACAGGC GGGTACGGTT TATACCCAGT GTGCCTTTAA ACTGGGGGTG ACCACCCAAA GTAGTGGAGG GGTATGGGGC ATCAACGCCA AAGCCAACAA ACAAATCATC GTAGAAGCCA CCGGCTGCAG TGGCGAGATT GTCTGGCAGC GCGAGGGGGG CAATAGCAAC ATTGAGATTA ACCAGGTCAA TGGACCGGTG CCCGCCAATA CGATTGTCTA CAGCAACATC CGAACCGGCT TTACGGTCAA CGCTACCTGC CGGACAACCG GTTGTCAAGC GACAACCGGC CCTCTGGATG TGCCCTCGAC CTCGACGCTC TGTGATATGG ATCATCGCTT GTTCATTCAG AACCTGGGGG CCTCAACCGG TGATCTAAGA CTTGCCGTCT CAACGATTAA CGGCAAGTTA CCCGGTTTGA CGGATTTACC TCTCAAGTGG GATGATAATG GATCGACCAC TAACCCCAGA ACGATCCCAA GACCCAACGT ACCCAGTGTT TTTTCGGTGA CAACCGAGAT TGGGGGCTGC AAAGCGGCCT ATGCCTATCA ACCGACCCCT CCTTCTCCGA ACACCTTACC GCCGATTCCC TGTATTGAAT TTACCATAAG CGCTCCGCCA ACTACAGATA TACCCTGGAA TAAGTCAGCT GTGGAGGTGA CCCTGGGGGC AAGTGGCTGC GCGAACCCCG ATCCCGGTAT TGTTAGCTGG ACGGATCAGG CCGGAAACCC AATCCTTCCC GATAAGACGG GGAACATCAC GGTGGTGTTT TCCCAAACGG GTACATCCAG TTTTTCGGCT ACCTGCTCGT TAACGGGGGA AACGAAAGTA GCGACCATCA CCATTCGTAA AGGGACAAAG CCACCTGTCA CCTTCAAGGT TACTCCGTCG GCCAGTGGCA TCATTCCTGC CGGTGGTGGG CCCGTTGATC TACTCTTGCA ATCCAGTGGC TGTACGGATG CCGATCCGGC ACTGCCCGAT GGAACCGTAA CCTGGAGAAA CCCGAATAAG AGCCCAATTG CGGCTGTTCC CGGTAAAATC GGCAGTACCC GCGTCTCGTT TACGCAACCG GGCACTTACA CCTATACGGC TACCTGTAGT TTGAACAATG TTACCCTGCC GGTAACCGTG ACAGTTACCC AACAGGTCAT TCCCATTCCA ACCGATCCCT GTAATTTTTA TGCCTATACG AATTCACAGG ATAACTTCTT TCCGACCAAT TCGTATAACA ACATTGAACT GACGGTTGTT GGCGGAACCA GTATTGCAAT CTATCCGGAA AACGGAGCAC CACCCATCAC GAACATTGGG GGAGGGAAGT ATGTGGCGTC CACTTCGGCC ATTACTCAAC CCATTATCTT TTCGTATCGG ATTACGAATA CTGGCCAAGG TGGTGAATGT ACAACCAGGG TAGTTATCAA CCTGTATGAC CAGGTTACGA CCTATCATTC CTTCGTGGCT TCCTCCGTAA CTCCGCCCAC GCCAGCCTAT CCAGAGAAGC CCAGTGGCAA TTGCGGTTCC TATTATGCTG GATCAGGAGC GGCTACCTTT GGTATTCCCT GGAATGGCAA TCAATATCAG GTCGACAAAG TAAAACGAAG TAATCACCCG AATTTAGGGG TCTTTGCCAG TTATCTCAGG AAGGCCGATG ATGAAAATCG AAGCGTCACT AATTTACCCG ACCTGGTCGG TTTGGTGGAT AAGCAATGCG ACGCCCGCAA AGGTCGGCTC CGGTTTTACG CTGACTATAG CCGTTCGATA GAACTACCTA TAGGGGCGGC ACTGACACCC ATGCTGCATG TGATGGTTCC CCGACCCGAC CGTACTACGA CGTACTATGG CCGCTGTTTT TACGACGAGG GGTATTGTGA CAGCGAAATC ACGCTGTCGA CCAACCTCAA TGGCGGAGGT CGGGTGGGTA CTTCCGAAGA TAGTAGCACG ACTGATGGTG GCCGACAGGC GGCTACTCAG CGCTGCGTCT ACTCGACCCA GGCGGCTGTT AAAACCTTGC TGGCCCATGT ACTCTGTGAT AAACTCAGTG CCGTTCCAGG TGGTGAAGAG GCCAAATTAG CAGCCATCAA AGCTACCCTT CAGCAACAAG GCATCCAACT GGCCGACATT ACGGATGCGA TGGTGGCGAA CCTGAAGGCT GGCGATTGCG CTAACGTGGT GACCGCGTTG ACCAATGTGC CCAAAGGAGC CGATGATGTG CAGCCGGTAG CCGATCTGGA TAAGCTCATC AACAACGATC TGGTGAATAC ACTGGTCAAT GATGCGCTAA GTGCCGTTGC CGAAGACGAT GTCATCGACA CCGACTTTGT GGAGCGGGAG ATTGAAACGT TTACACCCAC TGGTGGATTA CGAGTCGCTA ACCCCAATGC CCGACTGGCA GACCCGGGGA CATGCCCGGT CTACTACTTC TCACCAGCCG GTAAACGCAT TGTGGTGCCT GATGTGAGGG CCTGCGTGGT GAGCGTCAAT GGGGTACTTC TACAGTTTGT ACGGGATGGC AAAACTTATA TCCCCTTATA CAGCCGAACC ACAAACGCTT TCCTGGGCTA CTACGAGCAG ACAGCATTTT TGGCAAAGGC CAAACCCAAT ACGGTCAATG GTAAAACCGT TGACATTGCC CCCAAAACTG CCCTGACCGA CTGGGTGATT GACATTCAGT ATCCCGACGA GCAAACCGGT TTGGCCCGTT ACCGGGAGTT CATCAACATC AACAAGACCA GACCTGGCAT TATCCTGAAC TACAGTGAGG AGGCCTATGG TCAGATTCTG GCGATTCTGG CCCAGTTGCC AGACCTGCAC TTTCAGACCG TAGAAGGCAA TGGCTCGCCG TTTCTCTACG ACATGGCTAA GCACCTAAAA CAGCTAACAA CCTATCTTCA GCAAAGCAAT GATCGACTAG CCACATTGGT CGGCATTGTC AATGACTCAG CTTATGTCTG CCCCGTTGCC AATCCCCCGG CGGCCAATGC CGATCCGGTT TGTAAGCTCT ACAGTTGCGT CTACAACAGC AGCCTGAAAA ACTCCGACCG GGACTTGTTG AATGCCCGTT TAGACCTGGA CACCCGGCAA AAGCTGTTAA GCTTGCTGGC TCAAGGGAGC CTTACCTCAG GCTGGGTGCC GGTGGGCTGT GCCGTCTCGG CCGATGGGGA GGGAGCCATC CTGTCTTTGC TCAGATCGAC CCAGGAGAAT GATCGGAAAG CCATTCTGGA CCACATCAAT GGTTCTTTGG TGACCAACAG TTATTCGCCC TTGCAGGCCT TCATCTCCAA GCTGGATGGG AGCAACTTCG ATGCCCTGAT GAGTCTGTTG ACCAGTTGGG TCACCACCTA TTACCCCTCC TCCGAGTCGT GGGCCTCGAT CCTTCAACGG CAGGATCGGG CTAAACGGAA TATTCTGGTA CTGGGTAACT TCTCGGATCG CTATAGCCTA TCGGCCCAGT ACAGTGCCAA TAAGACCCTA CTGAATGTTG AGGTCAGTGT GCGGCTGTCA ACCACGAAGC TTTTCAAGCG TAAGATCGAT GTGCTGGACT ACGTGGTGGT GAAGTTTGCC AACGATTATG CTGCGGGTAG CCAAACCTTT GAGTCGGGCA AAATCTACAA GCTGCCTGCG GTATTGGTCT ATGAGCTGAT GAACGCCATG CAGCGGCAGA CCCGGCTGGA TTTGGCTAAG TATGGGGCCT ATGGGGTGTT TGCCGCTTTG ACAGCGGGTG AGATTGTAGC GGCCGAAACG GGCATAGAGC TAACCTTGGC TTTGTTAGAC ATGGGTGTGT TTGGCACAGA CATCGTTATC AACGAAGTGC TGGCTACCAA GCTCAACCAG ACTCCTGATG GCAAAGCGTT TCTGGACAAG TATAATAAAT TTGCACTCAT TTATGGCGGA GTTAGGGTGT ATGCTGACCT GACGGGCTTA ACGGCACAGA TGAAGAGTTT GGCTAATAAA CTTGACGATC CAGAAATAAA AACCCTCCAG CAATCTGTTG AACTGTCGCA ACTGGATAAA GACTTAGCAG AACTAAAAAC GGCAATTCTT AGTGACGATC CTACCTCTGT TCAAAAATGG TTTGATTTGT TTCAAGAGAC ATTTTTATAT AAAGGAGCAG CTTCTTCAAC ACATTCTATT CGGTACGAAC AAATCATCGC CGATTTGAAA GTTAATAATG TTAAGGTGAA ATATACTACT GATATAAAGT CCTGGTACGG TAATTACCAG CCTACTAAAG GCGAAGCAGG TCAGTTAACT ATTAATCCTG ATGTTGATTT GAGTACATTG GAGCATGAGT ATAAACATTT TTTGGATGAT AAAGCCAATA ATTATCCAGG CCCCTTTTAT TACTTGTATG ACGATGCGGG CATTCCGGTT AGAATAAAAA TGGAACGGGC TTCGTATGAT ATTGAAAAGT CTATTATACA ACAGCGTGTA GATTTGACCG AAGCCGAAAA AGTTAAATTC AGTACGATGT ATGAGAATTT GTATGAATAT GAGATTTTTA AAATTACTAG AAAAACACCA GATATAAGAT GA
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Protein sequence | MNRFYQALSL FVTGTLRCRW SILLVLSLMS QRNVAQSIQN YPVHTSAYFV GPPSQRLADY FSADKRLLVD LLLKDLTKPA IQVYLRWSLE GVGIRVGSQP GYVPPHFITL QPGILNRQRG SDLQADYFNP AAIQTQGIDP RSAYTIQLPE GFYTLNLEAL EASTGQIVSN TSQTFLVLTY PQPPLLNLPL TGSELSPTAL QKVPISWSPR HFATPTTNAV YTLKVCEVPE GFEPNEQVML TCTEPRLEMT IPATTTAPDI TQWIKPLEVG HRYAFQVSVT DLSGEMTNFV NQGRSQVSYF RYGKECRPPA FTIQSLGSDR VQLSWERTEG AQGYVVEYKL ATAPDWQTLS ATGTAQVIGG LKPTADYLFR MRSDCGGSAP SAPGEIQTWN IRDEAPDTPL QLPLTLTNPI AIRVQTGPDG QAQLPTSLSA LYRNYPSPSA PSPGTTSPPA GSNPTPGSQP TTTGAVSTTD TGGTGQATSS PTPADAALLT LPYCAMQASS FAGCEVPHPS VALPTGEKEL TSLQVGDVLG IYDYAVFVTR VGGGSPLSGE GLARLPFLGG TMVLVEFSGV SARAGEDGTN GGCVYQLAPS GFFRIKRTTQ AQVLAAQQGL IRQVLVQHSG NPADSTRGNP FVGTLGEALA KYDSVVVSLG TPQRQTLSAA TRQSLIQYLA AVAQGSESIR NSFDAVYGGS QERLVVSIRD SLAQLMGQVR ASLTAVQSGS SGADLEQLAA RYEALFAQLG QLTSPSHPTP VSPSLSPVVL SQLTDTSVKL SWQGDPSFSR YVVHYQLEGG GELLQTVTGT NIQLVNLKAG SNYNYTIEGY KGTELVSRYG GTPFTTLTKT IPAPQNLTYA VVDDHRVKLS WDKNSQHVSY KLVYTDATGE QRTVYPTTNQ VKLTGLATNQ AYTYAVMAYG SGSLVSDGAT SNFQLGTVCY ATMQASAERV IAGTEVTLTV SSCRDKEGNP GMVIWTGKGL PQTFGTTQVF RPSETATYTS SCRLMVDNGN GPEPVSCSDS KTITVDKACT GVIATVSPKT VDQYQPIVLQ ATGCASNIRW GVGYPTDAGV VSTQQAAIIY PTTSQNKAQI YTLACKDQTG TTCLVQAGTV YTQCAFKLGV TTQSSGGVWG INAKANKQII VEATGCSGEI VWQREGGNSN IEINQVNGPV PANTIVYSNI RTGFTVNATC RTTGCQATTG PLDVPSTSTL CDMDHRLFIQ NLGASTGDLR LAVSTINGKL PGLTDLPLKW DDNGSTTNPR TIPRPNVPSV FSVTTEIGGC KAAYAYQPTP PSPNTLPPIP CIEFTISAPP TTDIPWNKSA VEVTLGASGC ANPDPGIVSW TDQAGNPILP DKTGNITVVF SQTGTSSFSA TCSLTGETKV ATITIRKGTK PPVTFKVTPS ASGIIPAGGG PVDLLLQSSG CTDADPALPD GTVTWRNPNK SPIAAVPGKI GSTRVSFTQP GTYTYTATCS LNNVTLPVTV TVTQQVIPIP TDPCNFYAYT NSQDNFFPTN SYNNIELTVV GGTSIAIYPE NGAPPITNIG GGKYVASTSA ITQPIIFSYR ITNTGQGGEC TTRVVINLYD QVTTYHSFVA SSVTPPTPAY PEKPSGNCGS YYAGSGAATF GIPWNGNQYQ VDKVKRSNHP NLGVFASYLR KADDENRSVT NLPDLVGLVD KQCDARKGRL RFYADYSRSI ELPIGAALTP MLHVMVPRPD RTTTYYGRCF YDEGYCDSEI TLSTNLNGGG RVGTSEDSST TDGGRQAATQ RCVYSTQAAV KTLLAHVLCD KLSAVPGGEE AKLAAIKATL QQQGIQLADI TDAMVANLKA GDCANVVTAL TNVPKGADDV QPVADLDKLI NNDLVNTLVN DALSAVAEDD VIDTDFVERE IETFTPTGGL RVANPNARLA DPGTCPVYYF SPAGKRIVVP DVRACVVSVN GVLLQFVRDG KTYIPLYSRT TNAFLGYYEQ TAFLAKAKPN TVNGKTVDIA PKTALTDWVI DIQYPDEQTG LARYREFINI NKTRPGIILN YSEEAYGQIL AILAQLPDLH FQTVEGNGSP FLYDMAKHLK QLTTYLQQSN DRLATLVGIV NDSAYVCPVA NPPAANADPV CKLYSCVYNS SLKNSDRDLL NARLDLDTRQ KLLSLLAQGS LTSGWVPVGC AVSADGEGAI LSLLRSTQEN DRKAILDHIN GSLVTNSYSP LQAFISKLDG SNFDALMSLL TSWVTTYYPS SESWASILQR QDRAKRNILV LGNFSDRYSL SAQYSANKTL LNVEVSVRLS TTKLFKRKID VLDYVVVKFA NDYAAGSQTF ESGKIYKLPA VLVYELMNAM QRQTRLDLAK YGAYGVFAAL TAGEIVAAET GIELTLALLD MGVFGTDIVI NEVLATKLNQ TPDGKAFLDK YNKFALIYGG VRVYADLTGL TAQMKSLANK LDDPEIKTLQ QSVELSQLDK DLAELKTAIL SDDPTSVQKW FDLFQETFLY KGAASSTHSI RYEQIIADLK VNNVKVKYTT DIKSWYGNYQ PTKGEAGQLT INPDVDLSTL EHEYKHFLDD KANNYPGPFY YLYDDAGIPV RIKMERASYD IEKSIIQQRV DLTEAEKVKF STMYENLYEY EIFKITRKTP DIR
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