Gene Slin_4279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4279 
Symbol 
ID8728038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5163147 
End bp5163581 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content49% 
IMG OID 
Productrare lipoprotein A 
Protein accessionYP_003389062 
Protein GI284039132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTGA TCATGTCCAT TATGTTGTTT TTTAGCAACA TAAACCCGGC GGAGGCTCTT 
CCGAGCCTCA TACAGAAAGG CAAAGCGTCT TTTTATTCCA AGAAGTTCAA TGGTCGCAAG
ACCGCTTACG GGGAGCGCGT TAGCGCAGAA GCCCTCGAAG GAGCCCACCG TAACTTACCT
TTAAACACGT TGGTTGAAGT AACCAATCTC GACAATCAAC GCTCAGTAAT TGTACGAATC
AATGATCGGG GCCCTTTTGC CAAAGGGCGC GTTATTGATT TAACCGTGGC AGCCGCCCAT
GCTCTTGGCA TGGTTTCCAA AGGGATTGCC AATGTATCAC TTCGGGTTGT TGGCAAAGGC
TATGCCGTCG CTATGACGCC TTCGCCGTTT ACAACTCCAG TTGAGTTTCA GCCCTTGCTG
GAACCCGTTC TGTAA
 
Protein sequence
MSLIMSIMLF FSNINPAEAL PSLIQKGKAS FYSKKFNGRK TAYGERVSAE ALEGAHRNLP 
LNTLVEVTNL DNQRSVIVRI NDRGPFAKGR VIDLTVAAAH ALGMVSKGIA NVSLRVVGKG
YAVAMTPSPF TTPVEFQPLL EPVL