Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4274 |
Symbol | |
ID | 8728033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5157559 |
End bp | 5158308 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | glycosyl transferase family 2 |
Protein accession | YP_003389057 |
Protein GI | 284039127 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.467766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCAA CTCTCTCCAT CATCACCATC ACCTACAATG CCGAGCGGTT TCTGGAGCGC ACGATTCAGA GCATTGTGGC GCAGCAGGCT ACCGATTTTG AATACATTAT AGTTGATGGT GCATCCAAAG ATGGTACGCT GGATATTATC AGGCGTTACG AGCGCCACGT TACCAACTGG ATTTCTGAAC CCGACCGCGG CCTGTACGAT GCCATGAACA AAGGGCAGCA GCGGGCAACG GGCGAGTATG TGTGGTTCAT GAATGCCGGA GATGAATTGT ATGATTCGGA CACACTCGGG AAGCTGCTCG CCCAGATCAA GTTAACAGAC GCTGATGTTT ATTACAGCGA TGCGCTATTC GTTCATGAAG ATGGCAGCCC GGTTGGGTTG CGAAGCCAGA TTACGCCACA TACCTTACCC CACACCCTCA CCTGGCGCGA TATGGCCCTC GGCATGAAAG TATGTCATCA GGCATTTGTA GCCCGACGCA CGATTGCTCC GGTCTATCCG ATTGATAACC TCAGCGCCGA TCTGGACTGG GAGATTCGCT GTTTGAAGGC AGCCGCCAAA ATTCAATTCA GCCCCTTCAC GCTATGCCGG TATCTGGTGG GTGGCTTATC GGTGCAGCAG CATCGCCAGT CGCTCATTGA CCGCTTTAAA GTGCTCGTAA TGCACTTCGG ACTGGTACAA ACGATAATCA ACCATGGCAA GATCCTATGG CGGGCCAGTC AGTTTAAAAG AAGTAGCTGA
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Protein sequence | MPPTLSIITI TYNAERFLER TIQSIVAQQA TDFEYIIVDG ASKDGTLDII RRYERHVTNW ISEPDRGLYD AMNKGQQRAT GEYVWFMNAG DELYDSDTLG KLLAQIKLTD ADVYYSDALF VHEDGSPVGL RSQITPHTLP HTLTWRDMAL GMKVCHQAFV ARRTIAPVYP IDNLSADLDW EIRCLKAAAK IQFSPFTLCR YLVGGLSVQQ HRQSLIDRFK VLVMHFGLVQ TIINHGKILW RASQFKRSS
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