Gene Slin_4272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4272 
Symbol 
ID8728031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5155184 
End bp5156155 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389055 
Protein GI284039125 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.744435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA AGATACTTTC CCGCCCTGAG TTCCAGACTG AGCCGCCTGT GTTGGTCGAC 
ATTGGGGCAT CGGGGCAATT ACATGGCCGC TGGAAGGCGT TCGCTAAATA CGCCGTTTGC
ATCGCCTTCG ACGCCGACGA CCGTGACTTT GGCTATGTCG AAAGCGAATC AAAGCATTTC
AGGAAGCTAT ATACCTTCAA CAATATCGTT ACCGGGCCGC AATCGGCGGA AGAAGATAAG
GAAAGCTCGG ACTTTTACCT CACGGCATCG CCCCACTGTT CCAGCCTGTT ACCCCCCCGA
CCTGACCTGA TTCAGGAGTA TGCCTTTGCG CCCAAGTTTG AACTATCCAA AGTCGTTCAA
CTGAAGACGC GCAGTCTCCG CTCCACTCTC GATAGCCTGA ATATCGATCG GGTAGACTGG
TTCAAAACGG ACTCGCAGGG CACCGACCTC CGGCTGTTCC GTAACCTCGG CGAGACCCGG
TCCAAACGGG TGCTGACGGC CGAGTTCGAG CCGGGTATTT TATCCGTTTA CGATGGCGAA
GACAAGCTGC ATGAGGTGCT GCGCTTTATG GAAGAGCAGA ACAGCCACTG GCTGGTCGAG
TTAATCCCGA AAGGATCTCC CCGCATCACC CCGGCCCTGC TGGACAGTTT CACGACCAAT
CCGCTCCTCA AGAAGTTCGT TTTGTTTTCG CTGAAAAGCA GCGCGGCCTG GGGCGAAATG
ACCTACCTGA ACCGCTTTGC CGACGAGGCA GCTCTTACAC AGCGGAATCT GCTGTTGGGA
TGGGTGTTTG CGACATCGCT CAAACAGCAT GGGTTTGCGC TCATCCTGAC CCAAAAAGCC
AAAAGCCGTT TTTCGGACCC TATTTTCGAC GAGATGGAAA ACTATTCCCG TCGGCGGGTT
TGGGGGCGCA TCCTCGAAAT TGGCTTCTGG CCTGAAGTCG TGAAGAAATT CGATAAACTC
CTCGGTCGGT GA
 
Protein sequence
MIDKILSRPE FQTEPPVLVD IGASGQLHGR WKAFAKYAVC IAFDADDRDF GYVESESKHF 
RKLYTFNNIV TGPQSAEEDK ESSDFYLTAS PHCSSLLPPR PDLIQEYAFA PKFELSKVVQ
LKTRSLRSTL DSLNIDRVDW FKTDSQGTDL RLFRNLGETR SKRVLTAEFE PGILSVYDGE
DKLHEVLRFM EEQNSHWLVE LIPKGSPRIT PALLDSFTTN PLLKKFVLFS LKSSAAWGEM
TYLNRFADEA ALTQRNLLLG WVFATSLKQH GFALILTQKA KSRFSDPIFD EMENYSRRRV
WGRILEIGFW PEVVKKFDKL LGR