Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4264 |
Symbol | |
ID | 8728023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5147320 |
End bp | 5148021 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | pseudaminic acid CMP-transferase |
Protein accession | YP_003389047 |
Protein GI | 284039117 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.468178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACG TAGCCATCAT TACCGCACGG GGCGGCAGCA AGCGGATTCC CCGCAAAAAC ATTCGCCCGT TTCTGGGTAA GCCCATCATC GCCTACGTCA TCGACGCAGC CTTGCAGTCC GGCTTGTTCG AGGAAGTGAT GGTGTCGACC GACGATGCCG AAATTGCAGA TGTTGCCCGG CAGTACGGTG CATCTGTTCC ATTTCTTCGG AAACCCGAAA CCTCGGGCGA TTACGCGTCG ACGATTGATG TGCTGCTGGA AGTACTGGAC GAATACGAAA AAACTAGCCA GACATTTGAG TCGCTTTGCT GTCTGTACCC AACGGCTCCT TTCGTTACAG CCGATTTATT GACGGCATCG CATCAGGTAT TGCTCGATAA GAAGGTCGAT ATTGTGTATC CCATTCAGGC GTTTTCGTTT CCCATTCAGC GGGCGTTTAA ACTCAATGAC GGCCTGTTAA GCTGGGCGCA GCCGGATGCT TTTCTGCTGC GTTCGCAGGA TCTGGAACCC ATGTACCACG ATGCCGGGCA GTTTTACTGG TTCAACGTCG ACCGGCTGCG AACACACCGA CAATTGCCGG GCTTAACGGC TGGAGGAATT GAAATCGACG AAATGCACGC GCACGACATC GACACCGAAT CGGACTGGAA AGTAGCCGAA TTCAAGTATC GACTGCTCAA TAACTTACTA CTGAATGACT GA
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Protein sequence | MSNVAIITAR GGSKRIPRKN IRPFLGKPII AYVIDAALQS GLFEEVMVST DDAEIADVAR QYGASVPFLR KPETSGDYAS TIDVLLEVLD EYEKTSQTFE SLCCLYPTAP FVTADLLTAS HQVLLDKKVD IVYPIQAFSF PIQRAFKLND GLLSWAQPDA FLLRSQDLEP MYHDAGQFYW FNVDRLRTHR QLPGLTAGGI EIDEMHAHDI DTESDWKVAE FKYRLLNNLL LND
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