Gene Slin_4264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4264 
Symbol 
ID8728023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5147320 
End bp5148021 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content52% 
IMG OID 
Productpseudaminic acid CMP-transferase 
Protein accessionYP_003389047 
Protein GI284039117 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.468178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG TAGCCATCAT TACCGCACGG GGCGGCAGCA AGCGGATTCC CCGCAAAAAC 
ATTCGCCCGT TTCTGGGTAA GCCCATCATC GCCTACGTCA TCGACGCAGC CTTGCAGTCC
GGCTTGTTCG AGGAAGTGAT GGTGTCGACC GACGATGCCG AAATTGCAGA TGTTGCCCGG
CAGTACGGTG CATCTGTTCC ATTTCTTCGG AAACCCGAAA CCTCGGGCGA TTACGCGTCG
ACGATTGATG TGCTGCTGGA AGTACTGGAC GAATACGAAA AAACTAGCCA GACATTTGAG
TCGCTTTGCT GTCTGTACCC AACGGCTCCT TTCGTTACAG CCGATTTATT GACGGCATCG
CATCAGGTAT TGCTCGATAA GAAGGTCGAT ATTGTGTATC CCATTCAGGC GTTTTCGTTT
CCCATTCAGC GGGCGTTTAA ACTCAATGAC GGCCTGTTAA GCTGGGCGCA GCCGGATGCT
TTTCTGCTGC GTTCGCAGGA TCTGGAACCC ATGTACCACG ATGCCGGGCA GTTTTACTGG
TTCAACGTCG ACCGGCTGCG AACACACCGA CAATTGCCGG GCTTAACGGC TGGAGGAATT
GAAATCGACG AAATGCACGC GCACGACATC GACACCGAAT CGGACTGGAA AGTAGCCGAA
TTCAAGTATC GACTGCTCAA TAACTTACTA CTGAATGACT GA
 
Protein sequence
MSNVAIITAR GGSKRIPRKN IRPFLGKPII AYVIDAALQS GLFEEVMVST DDAEIADVAR 
QYGASVPFLR KPETSGDYAS TIDVLLEVLD EYEKTSQTFE SLCCLYPTAP FVTADLLTAS
HQVLLDKKVD IVYPIQAFSF PIQRAFKLND GLLSWAQPDA FLLRSQDLEP MYHDAGQFYW
FNVDRLRTHR QLPGLTAGGI EIDEMHAHDI DTESDWKVAE FKYRLLNNLL LND