Gene Slin_4263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4263 
Symbol 
ID8728022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5146151 
End bp5147323 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content58% 
IMG OID 
ProductUDP-4-keto-6-deoxy-N-acetylglucosamine4- aminotra nsferase 
Protein accessionYP_003389046 
Protein GI284039116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.534906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATAA TCCCCTACGG TCGGCAGCAC ATTACGGACG AGGATATTGC CGCCGTTGCC 
GATGTGCTGC GTGGCCCCTT TTTAACGCAG GGTCCGCATA TCGGTGCGTT TGAAACCGCT
TTTGCCCGCT ATATCGGCTG CAACTACGCT GTGGCGGTTG CCAACGGTAC GGCCGCGCTT
CACCTGTGTT GCATGGCCCT CGGCGTAACC GAAGGAACCC GCGTTATCAC TACGCCCATT
ACCTTCTCGG CTTCGGCCAA CTGCGTTCGC TATTGCGGGG GCGAAGTCCA TTTTGCCGAT
GTCGATCCCA AGACGGCCCT GCTGGACATT AATGCCGTAC GGACGCTTAT CGAACAACAC
CCCAAAGGCT ATTTCTCGGG CATTATTCCA GTCGATTTTG CGGGGTACCC GGTCGATTTG
GCCGCATTCC GCGAACTGGC CGATGAACAT GGGCTCTGGA TTCTGGAAGA TAGCTGCCAC
TCGCCGGGCG GTTCGTTTAC CGATAGCCAG GGCGTCGATC ACCGCTGTGG AGACGGCTCA
CTGGCCGATC TCGCCATTTT TAGTTTTCAC CCCGTCAAGC ACATTGCGGC CGGTGAGGGC
GGCATGATTA CGACCAACGA CGAAGCACTC TATAAACACC TGATGCGGCT CCGGACGCAC
GGCATCACCA ACAAACCGAA CGAGTTTACC GAACCGTATT CCGGCGAACC CGAACGCGGG
GGCTGGTACA TGGAGTTGCA GGAACTAGGC TATAATTACC GCCTGACCGA CATGCAGGCG
GCCCTCGGCA ATAGCCAGTT GGCCCGCGCC GAAGCCATGC TGGCCCGTCG GCAGGAAATT
GCAAAACGAT ACGACGATGC CTTTGCCGGA ACACCGGTGG TCACCATCGT TCCGCCCGCC
AGCGTCAGCC ATGCTTATCA CCTGTACGTC GTTCAGGTGG ATGACCGAAA GGGTCTGTAC
GACTTTCTGC GAACCCGCAA CATCATGGCG CAGGTGCATT ACATACCGGT GCATCTGATG
CCGTACTACC GGCAGTTCGG CTGGAAACCG GGGGACTTCC CTAATGCCGA ACGGTACTAC
GCCCGCTGCC TGAGTCTGCC CATGTTCCCA ACGCTGACGG ATGATGAACA GGTGTATGTG
ATCGACTCGG TGAAGGAATT TACAGGCGCA TGA
 
Protein sequence
MSIIPYGRQH ITDEDIAAVA DVLRGPFLTQ GPHIGAFETA FARYIGCNYA VAVANGTAAL 
HLCCMALGVT EGTRVITTPI TFSASANCVR YCGGEVHFAD VDPKTALLDI NAVRTLIEQH
PKGYFSGIIP VDFAGYPVDL AAFRELADEH GLWILEDSCH SPGGSFTDSQ GVDHRCGDGS
LADLAIFSFH PVKHIAAGEG GMITTNDEAL YKHLMRLRTH GITNKPNEFT EPYSGEPERG
GWYMELQELG YNYRLTDMQA ALGNSQLARA EAMLARRQEI AKRYDDAFAG TPVVTIVPPA
SVSHAYHLYV VQVDDRKGLY DFLRTRNIMA QVHYIPVHLM PYYRQFGWKP GDFPNAERYY
ARCLSLPMFP TLTDDEQVYV IDSVKEFTGA