Gene Slin_4262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4262 
Symbol 
ID8728021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5145006 
End bp5146022 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content51% 
IMG OID 
ProductUDP-N-acetylglucosamine 4,6-dehydratase 
Protein accessionYP_003389045 
Protein GI284039115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.404826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGATT TAACGAACAA ATCCATTTTG ATTACGGGCG GCACAGGCTC TTTCGGCAAG 
AAGTTTGTCG AGATGGTGTA CCAGCGCCAC CCCAACATTA AGCGCCTGGT CGTGTATTCG
CGGGATGAAC TGAAGCAGTT CGAAATGTCA CAGTACTATC CGCAGTCGAA ATACAAATCC
ATCCGGTTTT TCATTGGCGA TGTACGCGAC GGCGAACGGC TCAAGCGGGC CTGTGAGGGC
ATCGACATTA TTGTCCACGC AGCTGCCATG AAGCAGGTTC CGGCGGCTGA ATACAACCCG
ATGGAATGCA TTAAAACCAA CGTATTCGGG GCCGAAAATG TCATCAATGC CGCTATGGAC
AATGGCGTAC AGCGCGTAGT GGCCCTTTCG ACCGACAAAG CAGCCGCACC GATCAACCTT
TACGGAGCCA CAAAGCTGTG TTCTGATAAA CTGTTTGTAG CCGCCAACAA CATGAAAGGC
AGCCGCAACT TACAATTCTC GGTAGTGCGA TACGGCAACG TAATCGGATC GCGGGGGTCA
GTCGTGCCGT TCTTTCTGGA CAAACGGAAA GAAGGCGTAC TGCCCATCAC GCACCCCGAC
ATGACCCGCT TTAACATTTC CCTCGAAGAA GGGGTTGAAA TGGTATTCCA TGCGCTCGAA
CATGCCTGGG GCGGTGAAAT TTTTGTCCCC AAAATCCCCT CCTACCGCAT CACCGACGTA
GCGACGGCCA TTGGCCCTAA CTGCGAACAG AAGCTGGTTG GTATTCGTCC CGGCGAGAAG
CTTCATGAGG AAATGATTAC CGAAACCGAT TCGCTCAATA CCGTCGAAAC GGATAAATAT
TACGTCATTA CGCCCTCAAC ACCCACCTGG GGCATTGACG AGTACATGAA AGCCTTCAAC
GGGCGGCCGG TAGAAATGGG CTTCAAATAC AATTCCGGCA CCAACACCGA ATGGCTCAAC
ATCGACCAAC TGCGCGAGCA GATTCGCGAG CATGTTGATC CTAATTTTAA TGAATAA
 
Protein sequence
MLDLTNKSIL ITGGTGSFGK KFVEMVYQRH PNIKRLVVYS RDELKQFEMS QYYPQSKYKS 
IRFFIGDVRD GERLKRACEG IDIIVHAAAM KQVPAAEYNP MECIKTNVFG AENVINAAMD
NGVQRVVALS TDKAAAPINL YGATKLCSDK LFVAANNMKG SRNLQFSVVR YGNVIGSRGS
VVPFFLDKRK EGVLPITHPD MTRFNISLEE GVEMVFHALE HAWGGEIFVP KIPSYRITDV
ATAIGPNCEQ KLVGIRPGEK LHEEMITETD SLNTVETDKY YVITPSTPTW GIDEYMKAFN
GRPVEMGFKY NSGTNTEWLN IDQLREQIRE HVDPNFNE