Gene Slin_4243 details

Gene Information

• Locus tag: Slin_4243
• ID: 8728002
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: +
• Start bp: 5119839
• End bp: 5120576
• Gene Length: 738 bp
• Protein Length: 245 aa
• Translation table: 11
• GC content: 50%
• Product: hypothetical protein
• Protein accession: YP_003389026
• Protein GI: 284039096

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.927259
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 33
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAACGAA TTGTTCACAA GCACCCGCTG GCCATTCGCT GGTTTCACTG GATCAACTTC 
CCGGTTTTGT TCGTCATGAT CTGGAGCGGG CTGTTGATCT ACTGGGCGTA TGACCCCTAC 
AAAATCACTA TTGGTAGTTA TACGCTCGTT TCGTTCTTCC CGGATGGCTT TTACAAATTC 
CTGAAGGTTC CGCGCCGACT GGCCGAAGGG ATGGCATGGC ACTGGGTATT CATGTGGCTG 
TTTATGCTCA ACGGACTGGC GTATGTGATT TACACCTTTG CCTCGGGCGA ATGGCGGCAT 
CTGGTACCCA ACCGAAATTC GTTTCGCGAA GCCATTCAGG TAACGCTTTA TGACCTCGGC 
CTTCGGAAAA CGCAGCCATC TTTTGTCAAA TATAATGGCG CGCAGAAAAT TGCCTATTTC 
TCGATTATGC TCATGGGCGT TGGCTCCATA CTGACGGGCT TTGCGATCTA CAAACCCACT 
CAGTTTTCGT GGCTCACCAG CTTACTGGGA GGCTACAAAG CGGCCCGACT GGAGCATTTT 
GTTCTAACCG TCGGTTATGT ACTTTTCTTC TTTGTCCACA TCGGTCAGGT AATCCGGGCT 
GGCTGGAACA ATTTCCAGTC CATGATAACG GGTTTTGAGG TTATCAAACG AAACGACCCC 
AAACAGCCTT CGGTAACACC CGACCCCATC AGCGAACCCA TAGAACCTAC TCCAACGCCT 
ACCCCACTTG TAGCATGA 

 

Protein sequence

MKRIVHKHPL AIRWFHWINF PVLFVMIWSG LLIYWAYDPY KITIGSYTLV SFFPDGFYKF 
LKVPRRLAEG MAWHWVFMWL FMLNGLAYVI YTFASGEWRH LVPNRNSFRE AIQVTLYDLG 
LRKTQPSFVK YNGAQKIAYF SIMLMGVGSI LTGFAIYKPT QFSWLTSLLG GYKAARLEHF 
VLTVGYVLFF FVHIGQVIRA GWNNFQSMIT GFEVIKRNDP KQPSVTPDPI SEPIEPTPTP 
TPLVA