| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4233 |
|---|
| Symbol | |
|---|
| ID | 8727992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 5106498 |
|---|
| End bp | 5107241 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | IstB domain protein ATP-binding protein |
|---|
| Protein accession | YP_003389017 |
|---|
| Protein GI | 284039087 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0581118 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACC AAGCGACACT TGACCGACTA CGGGACCTTA AACTGGTGGG CATGTATCAG
GCCTTCGAGA CCCTGCTTCG CCTACCCCTT CACCAGCAAC CGCCTGCCGA CGAACTGCTG
GCCCAGCTTA CTGAAGCTGA ACATGAGTAC CGTCAACACC GACGCACCCA GATGGCCATC
CGGGCGGCCC GCTTTCGCTA TCAGGCCTCG CTGGAAGAGT TGCACTACGG CCCTGGCCGC
AACCTGGATA AGACGCTGGT GCTTCGTTTG GCCGACTGCC GCTTCATCGA TCGAGCCGAG
AATATCTTCC TGACGGGATC AACTGGCTGC GGCAAAAGTT ACGTGGCTTC GGCCCTGGGC
TATCAGGCCT GTCAGCTGGG GTATCGGGTG GGTTATCACA ATCTGATCCG GCTCATACAG
CGACTGCAAC TGGCTAAAGC CGACGGCTCC TACCAGCGGG AGATGAGTCG TCTGGAGCGG
CAACACCTGC TCATTCTGGA TGACTGGGGC TTACAACCCC TTGATCAGAA TGGCCGATTG
GCCCTGTTAC AGATCATGGA GGACCGGCAT GGCAAGGCCG CTACGATCAT CACCTCGCAA
CTGCCGGTGA GTAAATGGCA CGAATACATC GACGATCCTA CCTTGGCCGA TGCCATCCTG
GACCGGCTAA CTCACAAGGC TCATCGGATG GAGTTGAAGG GTGAATCGAT GCGACGCAAG
CAAAGTCTTG CGGCTGAGAA ATAA
|
|---|
| Protein sequence | MNNQATLDRL RDLKLVGMYQ AFETLLRLPL HQQPPADELL AQLTEAEHEY RQHRRTQMAI
RAARFRYQAS LEELHYGPGR NLDKTLVLRL ADCRFIDRAE NIFLTGSTGC GKSYVASALG
YQACQLGYRV GYHNLIRLIQ RLQLAKADGS YQREMSRLER QHLLILDDWG LQPLDQNGRL
ALLQIMEDRH GKAATIITSQ LPVSKWHEYI DDPTLADAIL DRLTHKAHRM ELKGESMRRK
QSLAAEK
|
|---|
| |