Gene Slin_4230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4230 
Symbol 
ID8727989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5101205 
End bp5102188 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content39% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389014 
Protein GI284039084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGA ACGAACATTT TGCGGCTAAC TTACATAACA CAACGCTTGG ACCACGTACT 
TGGCTCAGTG GACATATCTT CTACACGGAT GATTTAACAC ATCTAATTAT AGATAGTCTT
TTTTGTTGGG CTGAGACATT ACGAAAGCAG GAAATAATCG AAGGGTTCTT CTTTATTCGA
TATGCTGAGA ATGGCCCCCA TCTGCGATTA CGGTTGTTGG GGCAACCTGA CAAACTTCTT
GCCGAAGCTG TGCCGTTTCT GGAAGAGAAA ACCAAAATAT ACTTTATTCA ACGCCCTTCA
AAAAAGGTCA TTACACGTTT ATCAGAATGG TATCCTAATG ATTCATTGGT ATGGATTGCT
TATGAACCGG AAATTGACCG TTATGGAGGG CCAATTGCAA TCAGATTGGC TGAGAAACAT
TTTCAAGCCT CATCCGAAAC CATAGGCAGG GGAATCGCTT CAGCCGAATT GACTTATAGC
CATTCGGTAG GTTTAGCTAT ACAACTCCAT GCTGTTTATT CATTTTTCAT GCTTGATACT
ATTGCCGAAC GCATTGATTT CTGGAATACA TTCACCGCTA ATTGGTCAAT GTATATGCTG
AAGACTCAAA ATTTAAAAAA CACATCGAAT TACAATATGC TTTTAGATAC ATACAATAAG
TACGAAGCTA TTTTCGATAA ACAAAAACTT GCCCTAACCC CTTTTTTCTC AAACTTATGG
ATAATGTTAA ATACCCAATC TGACTTTCAA GAATCTTGGT ATATGGATTG GATTGAACAT
ATGCGCCAGC ACCGTCGAGA TATTGACGTG TTAGTTCAGT CCGGCCAAAT GAAAACTCCC
TATACCACTA ATCCTTTATC TATTGCAGGG CGACAATATT TGCTACATAG CTATATCCAC
ATGTCTAACA ATCGTTTAGG TATTAGCAAC TATGATGAGG GGTACATTGG CTATATTATG
CAAAAGCTAT TAAGTACCTG TTAA
 
Protein sequence
MNWNEHFAAN LHNTTLGPRT WLSGHIFYTD DLTHLIIDSL FCWAETLRKQ EIIEGFFFIR 
YAENGPHLRL RLLGQPDKLL AEAVPFLEEK TKIYFIQRPS KKVITRLSEW YPNDSLVWIA
YEPEIDRYGG PIAIRLAEKH FQASSETIGR GIASAELTYS HSVGLAIQLH AVYSFFMLDT
IAERIDFWNT FTANWSMYML KTQNLKNTSN YNMLLDTYNK YEAIFDKQKL ALTPFFSNLW
IMLNTQSDFQ ESWYMDWIEH MRQHRRDIDV LVQSGQMKTP YTTNPLSIAG RQYLLHSYIH
MSNNRLGISN YDEGYIGYIM QKLLSTC