| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4229 |
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| Symbol | |
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| ID | 8727988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5099028 |
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| End bp | 5101208 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | |
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| Product | ABC transporter related protein |
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| Protein accession | YP_003389013 |
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| Protein GI | 284039083 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAT TTCCTTTTAT TAAGCAGTTG TATGAGATGG ATTGTGGCCC TACCTCATTA
TTAATGATAG CCCAGTATTA CGGAAAACGA TTTACTCTTC ACAAACTTAA AGAAAAAGCA
GGGAACAATC GGGCCGGCGT TTCCATTAGC GGATTGGCTA ATGCTGCTGA AAGTATTGGC
TTTAAAACAT TATCAGCTCG TTTACCCTTC GACAAGTTTC GGGAATTAGC GCCCCTTCCG
GCTATTGCTT ATTGGCAGGG AAGACACTTC TTGGTTGTTT ATAAAACAGA TCGAAAATTC
ATTTATGTTT CAGATCCTGC CCGCGGTCAA CTACGTTATA CCCACAATGA ATTTAAAAGT
GGGTGGGTAG AGCAGGGTGA CATTGGAAGT GTATTATTTG TTGAGCCTAC ACCCGCTTTT
TATCAATATG AAGAAGATAA AGTAACACAA GATTCGGGAT GGGAATATAT ATTTAACTAT
ATCAAGCCAT TTAAAGGATA TATTTTTCAA TTGTTTTTAG GTATGCTGCT TGGCAGTCTA
CTGATGCTAG TATTTCCCTT CTTAACTCAG TCGATTGTCG ATGTAGGAAT TAATACCAAT
AATATTGGAT TTGTAAACCT GATACTATTA GCGCAGTTGA TGCTTACTAT CAGTCGAACG
AGTGTTGAGT TTATTAGAAG TTGGCTGTTA TTACACATTA GTTCTCGGCT AAGCATCAAT
ATCTTAGCCG ATTTCCTCAT TAAAATGATG AAACTTCCAA TTTCATTTTT CGACACCAAA
ATGACAGGAG ACCTACTGCA ACGGATTGGG GATCATCGTC GTATAGAATC ATTTTTATCA
TCCCAAACGC TCAGCCTTAT CTTTTCACTT TTCAATCTGC TCATCTTTAG TGCTATAATG
ATATACTACA ACCTCACTAT TTTTGGAGTT TTTGTAGCTG GTAGTATTAT ATATATGTTC
TGGGTGTTAT CGTTCATGAA TCGACGGCGT AGACTTGACT TTCGTATGTT TGATCAGCAG
TCGGCAGCAC AGTCAAACAT TATACAGCTG ATTACGAGTA TTAGCGAGAT TAAACAACAA
AACAGTGAAC GCGTTAAGCG TTGGGAGTGG GAGCATTTAC AAGCTCGTCA GTTCCGCATC
AATCTTTACA AATTATCTTT AAACCAAATA CAAGATGCAG GGTCAATGCT AATTAATGAA
ACGAGAAATA TTTTTATCAC TTATTTAACT GTCCGTTCAG TTATGAATGG GGACATTACA
TTTGGAACAA TGCTCTCAAT TCAATATATC ATCGGGCAGC TTAACGGGCC TATTTTAACG
TTTATAGGCT TCATGCACTC GTTTCAGGAT GCGCAAATTA GTTTAGAGCG TCTTCAGGAA
ATATATAAAC AACCCGATGA AGAACCCGAT CCTAGCTCAA AAATTACCCG TCTTCCTGCT
GACCAGTCGC TATCTCTTGA TAATATCTCA TTTTCTTATC CAGGCATTCA ACAGCCTGTA
ATAGAGAGCC TTAGCCTTTA TATTCCAGCA GGTAAAACTA CAGCAGTTGT TGGATCAAGT
GGTAGCGGTA AAACTACATT GATCAAACTA TTACTTAAAT ATTACCCCCC CACAAGTGGT
GAAATTAGGC TTGGTAATGT TAACCTAAAT AGTGTCAGCA TTCGTCTCTG GCGCGACCAA
TGTGGTGTTG TATTACAAGA TGGTGTACTT TTTAGCGATA CTATTGCGCG TAATATTGCT
GTAGCAGATG ATGAAATTGA CTGGGAACGT CTTGAATATG CTTGTAAAAC AGCTAATATC
GCATCATTCA TTGAAACATT ACCACAAAGC TATCGTACCA AAATTGGTAG TGAAGGGCAA
GGACTAAGTC AAGGCCAAAA ACAGCGTATC CTACTTGCTC GTGTTGTGTA TCGAAACCCC
GCAATAGTTA TTCTCGACGA AGCTACCAAT GCCCTTGACG CGAATAATGA GCGTACAATC
TTGGCGAATA TGAACGAGTT TCTACACACC AAGACGGTAG TAGTAGTAGC ACACCGACTT
AGCACAGTTA TTAATGCTGA CCAAATTGTC GTACTTAATC AGGGACGTAT CCAAGAATGC
GGAACCCACG ACGAACTTAT ACTTAAACAT GGTGCTTACT TTCAATTAGT CCGCAACCAA
TTATCACTAG GTACAGATTA A
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| Protein sequence | MKRFPFIKQL YEMDCGPTSL LMIAQYYGKR FTLHKLKEKA GNNRAGVSIS GLANAAESIG
FKTLSARLPF DKFRELAPLP AIAYWQGRHF LVVYKTDRKF IYVSDPARGQ LRYTHNEFKS
GWVEQGDIGS VLFVEPTPAF YQYEEDKVTQ DSGWEYIFNY IKPFKGYIFQ LFLGMLLGSL
LMLVFPFLTQ SIVDVGINTN NIGFVNLILL AQLMLTISRT SVEFIRSWLL LHISSRLSIN
ILADFLIKMM KLPISFFDTK MTGDLLQRIG DHRRIESFLS SQTLSLIFSL FNLLIFSAIM
IYYNLTIFGV FVAGSIIYMF WVLSFMNRRR RLDFRMFDQQ SAAQSNIIQL ITSISEIKQQ
NSERVKRWEW EHLQARQFRI NLYKLSLNQI QDAGSMLINE TRNIFITYLT VRSVMNGDIT
FGTMLSIQYI IGQLNGPILT FIGFMHSFQD AQISLERLQE IYKQPDEEPD PSSKITRLPA
DQSLSLDNIS FSYPGIQQPV IESLSLYIPA GKTTAVVGSS GSGKTTLIKL LLKYYPPTSG
EIRLGNVNLN SVSIRLWRDQ CGVVLQDGVL FSDTIARNIA VADDEIDWER LEYACKTANI
ASFIETLPQS YRTKIGSEGQ GLSQGQKQRI LLARVVYRNP AIVILDEATN ALDANNERTI
LANMNEFLHT KTVVVVAHRL STVINADQIV VLNQGRIQEC GTHDELILKH GAYFQLVRNQ
LSLGTD
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