Gene Slin_4225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4225 
Symbol 
ID8727984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5093458 
End bp5094072 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389009 
Protein GI284039079 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.66794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCATT TAAACCAGTC GGTAAAGGGC TTGAATTCGT TTTACAGCCG CTGGATTTAT 
CAGGTTATCC AACCTGGTGT ATTCGCACGA ATATCACGTG GAAAGGGCGA CTGGAAGTTT
AAAGGGCTGC CAGTGATAGG ATTGGCTCTT CTGCTGTTTG TCCAGTTAAA GCCTGCTTCA
TCAGGACTGA CGGTTTATGC CTTTCTTAGC ACTGAGTGCC CCATTAGTCA GCAGTACGTT
CGGACATTGG AAAAACTGCA CCAGCGGTAT AGCCCAGTTG GGGTTCGATT TATAGCCATG
TTTCCGCTGT CCACTGATTC GCCCCAACGG ATCAGGCAAT TCCGCTCTGA ATATGGCCTT
CCTTTTACTG GCCGCCCGGA TGTTGGCGCG CAACTGGCCC GACAATTCCG TGTACGTACC
ACGCCCGAAG TAGTAGTTAT GCAGGCAAAT GGCATCGTAC GATACCAGGG CGCTATCGAC
GATTGGTATA TTTCGCTGGG CAAGCACCGC CCCCAGGTGA CGAACGCTTA TCTTCAGCAA
GCTCTGGACG CGCTGCTGGC CAATCAGGCC GTTACACCGG CCCGAACAGA GGCTATTGGC
TGTTTATTGA ACTAA
 
Protein sequence
MGHLNQSVKG LNSFYSRWIY QVIQPGVFAR ISRGKGDWKF KGLPVIGLAL LLFVQLKPAS 
SGLTVYAFLS TECPISQQYV RTLEKLHQRY SPVGVRFIAM FPLSTDSPQR IRQFRSEYGL
PFTGRPDVGA QLARQFRVRT TPEVVVMQAN GIVRYQGAID DWYISLGKHR PQVTNAYLQQ
ALDALLANQA VTPARTEAIG CLLN