| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4224 |
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| Symbol | |
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| ID | 8727983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5089716 |
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| End bp | 5092907 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003389008 |
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| Protein GI | 284039078 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.25512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGAA TTCTAATATT GAGTTTGCTG TTCATAGGCT CAATCTGGTC TACAGCGTGG
GCTCAGGAAC GGAGAGTAGT CGGCAAGGTT ACGTCGGCAG AGGATGGGTC CGCTTTACCC
GGTGTTTCGG TGGTAGTAAA AGGATCGACG AAAGGGACAA CGACGGATGC CAGTGGTATT
TATAGTCTTA CGGTACCCAG TGGAAAAGGG ACAATTCTGG TATATAGCTT CGTCGGTGTT
ACGACGCAGG AAGTTAAACT CGGCAGTGAG TCGGAAGTGA ATGTAAGCCT GGTGTCGGAC
TCGCGTCAAC TGTCGGAAGT TGTGGTAACA GGGGTTGGGG TGGCTACCTC AAAAACCAAG
TTAGGTATTG CCGTGGAATC AGTATCGGCG AAAGACCTTC CCGCTGCACC AACGGCTTCT
ATCGACCAGG CACTGGTTGG TAAAATTGCC GGTGCTCAGA TCGTGAGTGC CAACGGTACA
CCTGGCTCAA AAGCCAACAT TCTGCTGCGC GGTATCAACA CAATTAACCG GGGTACATCG
CCAATTGTGT TGATGGATGG TGTGCAGGTG GGTTCTACCG ACATTAACAG CCTCGATCTT
AGTACCATTG AGCGGGTTGA AGTTATCCAG GGTGCGGCTG CCGGTACACT GTACGGAGCA
CAGGGTGCCA ATGGCGTTAT TCAATTGTTC AGCAAACGGG GTAAAGATGG CCCGGCGCAG
ATCAGCTTCT CGAACAGCTA TGCCAGCAAC ACCTACATCA ACAAAGGTGG TGTGGCCCAG
GCCGATAAAC ACGCCTTTGT AACGGATGCC AGCAACAATG TAATTGGTGT GTCCGGTAAG
CCCCTTGCTT TCGATCCGGC AACCAGCACC TGGAGCGAAA ACGTACAGTA CAATGCCCTG
GATGTAAACA GCCAGGCCAA CAAGCCCTAC GACCAGAACC TGAAGTTCTA CGATTATTAC
AAGATGTTTT TCCGGCCTTC GGAAACGATC AACAACTCGC TGAACATCTC GGGCGGAAGC
GGTAAAGCCG ATTACAGCAT CACGGCTTCC AATAGCTACC AGTCGACCAT TCTGAAAAAC
AATGGTGCTT TCAACCGGAG CAACCTGGTT AGTAACATTG GGATGACCCT TGCCAAGAAT
TTGACCTTGC GCAGCATATC TCAGCTGGTA TATACCAAGA ATACGATCAA CACCTACGAC
CGGGCTGTCT GGTACGATAT CAACAACACC CGTCCGTTCG ACAATTACGA TTATGTTGAT
CCCGACGGAA ACTATGCCGC TTATTTCGGC AGCGCGTCGG GCGTAAACGG GTACAACCCG
AACTACCGTC TGCAATACCG AAATCACGTT GATAACAAAG TAGACGTTAT TCAGAGCGTT
GAACTGGACT ACAAGCCCAT TAAATACCTG GACCTGAATG CCCGCTATGG TCTGAACTAC
ACCCAGGAAG GCGAACGCTA TACGTATGGC AACCAGACCC TGAACCGCAA CATCATTGCC
AACGGAGCCG GTTATGCTAC TTCGCTGAAC GCCAGTGACG CCAAAGGGGA GATTTCGACC
TACGATTACA AAACCGTATT CCAGAACTTC CTGGCCAGTG CCTTCATCAA AACGGATTTC
CAGGAAGATT TTAAGCTGAA TATTCCCATC CGTACATCAA CGCAAATCTC GTTCGACTAT
CGGAAAAACA ATTACAAGGA ATTCGATACC TATGCGCTGG GCGTACCTAC CTACAACCCG
TATACAGCCG CTCAGGCCAG TACCTACCGG GTTTCGCTTG ATAACAGCAC GCCATTCGTA
ACGTACGGAT ACCTGATCAA TCAGCACATC GAATACGGTG AACTGCTGGG TGTTACCGCC
GGTTTCCGTT CCGATTATTC ATCGGCATTC GGACGTGGGT CGACGCCGTT TACCTTCCCG
CACGCCGATG GATATATCCG TCCTTCGTCG CTTACGTTCT GGCAGAACAG CGCCCTGGGA
ACGTACGTGC CTGAGTTCAA ACTGCGGGCG GCTTACGGAC AGGCGGGTAT TCAGCCTAAG
CCGTTTGACC GGTACGTAAC GCTGGGTACG CGTACGTTTG GAGCTAACAA CGTCTTTTAT
AACACTGTTA CACAAAGTAA CCCGGATTTG GGCGTAGAGG TGTCGAAAGA ACTTGAACTG
GGAACGGACT TCACGATTAA AGGCGGCAAC GGCGATTGGC TCCGTAAGCT GAACTTCTCG
TTCAGCTACT GGGATCGTTC TACCGACAAT GCCATCTATA ACGTAAACTC GGCTCCGTCT
ACGGGTATCG GTACGGTGAA AGACAATGCC TTCTCGCTAT CTTCGAAAGG TACCCAGTTC
TCCCTGAACG CGACCGTTTA CCGGGGGCGT AGCTTTACCT GGAATTTCAC GACGAACTTT
GGCCATCAGA GTTCACAGAT CGATGCCGTA AAAGGAAATC AGCAGATCGT TGTGACATCC
AGCGCGGGTA GTACGAACTA TGTACTGAAA GCCGGTCAGA AAATTGGTCA GCTGTTCGGA
TTCCTGGCTA TTCATAGCCT TGATCAGGTG TTGCCCGATG GCAAGCCCGC CATTGCCGAA
AGCGCTAAAG CAAATTACGA AGTGGCCAGC AACGGCTACG TGGTCAACAA AACGACCAAG
CAGCCTCTGT TTAGCTCGGC TCAGTACAGC TTCGGCGATC CGAACCCTAC GTTTGTGTCG
TCGTTCATCA ACGATATTTC GTTCCGCGAC ATCGTAACAC TGAACTTCCA GTTCGACTGG
ACGCAGGGCA GCCACATTTA TAACCAGACG AAAGAGTGGA TGTACCGCGA TGGTATCCAC
AAGGATTACA CCAACCCAAT TACGATAAAT GGTCAAACGG GTGCCTGGAC GGCCTTCTAC
CGGGGTGTTT ATCAGGCGGG TGCCAACAAC GGAACGAAAG ATTACTTCTA CGAAGATGCT
TCGTTTGTAC GGCTTCGGAA CGTTGCGCTG GGTGTAGAGT TGACCAAGCT CATCAAGTTG
CCGATGCGCC GGTTACAGGT TGTCTTCAGC GGTCGTAACG TGCTCACCTT CACGAAGTAC
ACAGGATTCG ATCCTGAGGT AAGCTCCGGC CAGACAACGG GTAACGAAAG TTCGGCATGG
GATCGGGGTA CGGACCATAA CACGACGCCA AACAACCGTT CGTATCAGGT TTCTCTCAAT
TTTGGCTTCT AA
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| Protein sequence | MSRILILSLL FIGSIWSTAW AQERRVVGKV TSAEDGSALP GVSVVVKGST KGTTTDASGI
YSLTVPSGKG TILVYSFVGV TTQEVKLGSE SEVNVSLVSD SRQLSEVVVT GVGVATSKTK
LGIAVESVSA KDLPAAPTAS IDQALVGKIA GAQIVSANGT PGSKANILLR GINTINRGTS
PIVLMDGVQV GSTDINSLDL STIERVEVIQ GAAAGTLYGA QGANGVIQLF SKRGKDGPAQ
ISFSNSYASN TYINKGGVAQ ADKHAFVTDA SNNVIGVSGK PLAFDPATST WSENVQYNAL
DVNSQANKPY DQNLKFYDYY KMFFRPSETI NNSLNISGGS GKADYSITAS NSYQSTILKN
NGAFNRSNLV SNIGMTLAKN LTLRSISQLV YTKNTINTYD RAVWYDINNT RPFDNYDYVD
PDGNYAAYFG SASGVNGYNP NYRLQYRNHV DNKVDVIQSV ELDYKPIKYL DLNARYGLNY
TQEGERYTYG NQTLNRNIIA NGAGYATSLN ASDAKGEIST YDYKTVFQNF LASAFIKTDF
QEDFKLNIPI RTSTQISFDY RKNNYKEFDT YALGVPTYNP YTAAQASTYR VSLDNSTPFV
TYGYLINQHI EYGELLGVTA GFRSDYSSAF GRGSTPFTFP HADGYIRPSS LTFWQNSALG
TYVPEFKLRA AYGQAGIQPK PFDRYVTLGT RTFGANNVFY NTVTQSNPDL GVEVSKELEL
GTDFTIKGGN GDWLRKLNFS FSYWDRSTDN AIYNVNSAPS TGIGTVKDNA FSLSSKGTQF
SLNATVYRGR SFTWNFTTNF GHQSSQIDAV KGNQQIVVTS SAGSTNYVLK AGQKIGQLFG
FLAIHSLDQV LPDGKPAIAE SAKANYEVAS NGYVVNKTTK QPLFSSAQYS FGDPNPTFVS
SFINDISFRD IVTLNFQFDW TQGSHIYNQT KEWMYRDGIH KDYTNPITIN GQTGAWTAFY
RGVYQAGANN GTKDYFYEDA SFVRLRNVAL GVELTKLIKL PMRRLQVVFS GRNVLTFTKY
TGFDPEVSSG QTTGNESSAW DRGTDHNTTP NNRSYQVSLN FGF
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