| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4221 |
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| Symbol | |
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| ID | 8727980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5083273 |
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| End bp | 5084646 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003389005 |
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| Protein GI | 284039075 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.964616 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGCT TTCTACGATA TAGCCTATTG ATTACACTGG TGAGCCTGGG GGCCTGTCAG
GAGGTACTCG AACCCAAACC GGTTACCCTG CTCGTCGATG AACTGGTGCT GAACGAACCC
AATGACGTGC AGCCAGTACG GATTGGTTTG TACAGTGCGT TTCGGGGCAT GGCGTCTCCC
AACATCATAG CCGGGGACTT TACTGCCGAT TACATCCAGG CAAACGGGAC CTTTACCGAT
AATATCGAGT TCGGTACCAA ACGAATTACG GCAACAAATG GGGCCGTCGA TGCGCTTTGG
GGTAGTATTT ACAACACCAT TTACGTCGCT AATTTTATTC TTGAACGGTT ACCATCTGTG
CCAAATGTGA CCGAAGCCAC CCGAAAACAG GTTACGGCCG AAGCCCGTTT CTTGCGCGGT
TGGGCTAACT TTATCGGGGC CTACACCTTC GGCGACATTC CTAAAGTCAC CTCCACGAAT
CAGGTGGCTA ATACGACGAT CACCCGGTCG GCAAAAGCAG ATATTCTGGC CTCTGTTCTG
GCCGATTATC AGGCCGCGCT GACCGATCTG CCCAACGTGA CCTCGGCTTC GACCAATGCA
ACGACCAATG CCGCTTACAT CAACAAGATA AATTGCCAGG CAGCAATGGC CCGCTTTTAC
CTGTACCAGA AAAACTGGAC ACAGGCTGAG CAACTGGCTA CAGTTGTGAT TAGCTCGGGC
GTGTATTCGC TGCAAACCAA TTACTCGGAC GTTGTCACAA AAGATTTTAC CAATGAATCA
ATTATTGAAG TAGGGTACAA CCTGACGGAT GATCCCGGCA CAGGAGCTTA CAGCCTGAAT
AACCTGCTGG TGGGTCGGCG GGAAGTTATT CCATCCAACC AGCTCGTTAG CTCGCTGCTC
TCGGTCGAGT CCGGTACGCG TAGTGCAACC ATTACCTTCA ATGCCCAGCA GCAGCGGGGA
AATGATAATG GCTGGACGGT GCGGAAATAC GGTACCGCTT CGGAAGATAA CAACAACATT
GTGCTGATAC GGCTGGCCGA AATGTACCTG ATTCGGGCCG AAGCCAGAGC ACAGCAGGGT
AAACTAACGG GTGCATCGGG GGCTATTGCT GATCTCAACG TGCTCCGTAC CCGGGCAAAA
GCACCAGCCA TTACGGCAGC CGCTCAGGCA GATGTACTCC TCGCCGTAGA GCGGGAACGG
GTATATGAAT TGGCGTTTGA GGGCCATCGC TGGTATGATC TGGTTCGGAC TGGCCGGGCG
CAGGCGGTTA TGTCGGCGTT TTCCCCCAAC TGGAACAGCC GCTTTGAACT CTGGCCGATA
CCGCAGCGGG AAATTCAGCA AAACACAGCC TTAACCCAAA ATCCGGGCTA TTGA
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| Protein sequence | MIRFLRYSLL ITLVSLGACQ EVLEPKPVTL LVDELVLNEP NDVQPVRIGL YSAFRGMASP
NIIAGDFTAD YIQANGTFTD NIEFGTKRIT ATNGAVDALW GSIYNTIYVA NFILERLPSV
PNVTEATRKQ VTAEARFLRG WANFIGAYTF GDIPKVTSTN QVANTTITRS AKADILASVL
ADYQAALTDL PNVTSASTNA TTNAAYINKI NCQAAMARFY LYQKNWTQAE QLATVVISSG
VYSLQTNYSD VVTKDFTNES IIEVGYNLTD DPGTGAYSLN NLLVGRREVI PSNQLVSSLL
SVESGTRSAT ITFNAQQQRG NDNGWTVRKY GTASEDNNNI VLIRLAEMYL IRAEARAQQG
KLTGASGAIA DLNVLRTRAK APAITAAAQA DVLLAVERER VYELAFEGHR WYDLVRTGRA
QAVMSAFSPN WNSRFELWPI PQREIQQNTA LTQNPGY
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