Gene Slin_4215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4215 
Symbol 
ID8727974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5077525 
End bp5078856 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388999 
Protein GI284039069 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.717116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCC GGCTTGAGCA ATACTGGCAG CAACTTAAAG AATCATTGTG GTTTGTGCCG 
GGCCTGATGG TACTGTTTTC CTTTGGGCTG GCCTATGGGT TAATCGAGTT CGATGTGCAT
ACTGCCTGGA ATGGGCAGAA ACGGCTTCCT CTTCTGTTCG GTACCGGAGC CGATGGAGCC
CGGGGTATGC TGTCGGCCAT TGCGAGTTCA ATGCTTACGG TAGCTGCTCT GGCCTTTTCC
CTGACCCTGG CCACCATTAC CCAGGTGAGT AGCCAGTATT CGCCACGCGT GTTGCGAAAT
TTTATGCGGG ATCGGCTCAA TCAGCTGGTT ATGGGTTACT TTGTCAGTGT CTTTGCCTAT
TGCCTGATCG TACTGGGTAC GATTCGGGGA ACCGATGAGA TAAAATTCGT TCCGGCCACG
GCTGTGCTGG TTGGTTTGTT ATTAGCCCTG GGTGGGGTAG CTGCGCTGAT CTTTTTTATA
CACCATATTG CCGAATCGCT CCAGACAGGC ACCATTGTCC AGCATATTTT CCATGAAACG
AGTAAAGCCA TTGAGAGCCT TTTTCCAGAA CGGTTTGGTG AACCGATCGA CGACCCTGAG
AAAGCTGAAG CAGCTTTACA CTATACAGAA GAACAAAAGG GCTGGCATCC AGTCAGGACA
AGTCAGTCGG GTTATCTGCA ACGCATCAAC ACCGATGGGC TGCTGGACTG GGCTGGTAAA
AACCATGTGG TGCTGCGTAT AGAAAAAGAA ATGGGAGCGT TTGTGGGCGA GGGAACTATA
CTCTTTAGCG TTCGTAGTGG TATGGAGCGC CCTGACCCGG CTGAAGCCGA CTGGCCTGGT
GATCTGATGA AGTACGTAAG CATCGGACGG CATCGCAACG TAGAGCAGGA CGTTGCGTTC
GGTATTCAGC AATTGGTAGA TATTGCACTC AAGGCACTTT CGCCGGGTAT CAACGACACA
ACTACCGCCA TAATGGCGGT AGATTACCTC GGTGCTGTTT GTGAACGACT TGCCCGGCGC
GAGTTTCCAT CCCGCTTGCG TTCTGACGGT AAGCACCTGA GGGTTTTGAT TCGCAGTACG
AGTTTTGACG ACTATATCCG GCAGGCGTTT GACCTCCCCC GTATCAATGC CAGAGGAAAC
CACGCCGTAT TTCGTCGATT ACTGCGGGCG TTGGCTCTGG TAAATGACGC AGCCTGTTCC
GTAGACCGCA AACAGATCCT TATAAAGCAG GCATCGCTAC TTGTGACCTA CTCGGAGCAG
ACGCTCAATA GCGATTATGA AAAGCAACAG GTACTCGACT TGTACGCCCA GCTTAAAAAG
ACATGGTCAT AA
 
Protein sequence
MTTRLEQYWQ QLKESLWFVP GLMVLFSFGL AYGLIEFDVH TAWNGQKRLP LLFGTGADGA 
RGMLSAIASS MLTVAALAFS LTLATITQVS SQYSPRVLRN FMRDRLNQLV MGYFVSVFAY
CLIVLGTIRG TDEIKFVPAT AVLVGLLLAL GGVAALIFFI HHIAESLQTG TIVQHIFHET
SKAIESLFPE RFGEPIDDPE KAEAALHYTE EQKGWHPVRT SQSGYLQRIN TDGLLDWAGK
NHVVLRIEKE MGAFVGEGTI LFSVRSGMER PDPAEADWPG DLMKYVSIGR HRNVEQDVAF
GIQQLVDIAL KALSPGINDT TTAIMAVDYL GAVCERLARR EFPSRLRSDG KHLRVLIRST
SFDDYIRQAF DLPRINARGN HAVFRRLLRA LALVNDAACS VDRKQILIKQ ASLLVTYSEQ
TLNSDYEKQQ VLDLYAQLKK TWS