Gene Slin_4214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4214 
Symbol 
ID8727973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5077121 
End bp5077498 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF1622 
Protein accessionYP_003388998 
Protein GI284039068 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.738281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAT TTATTAAAGC GGCCACTTTG CTATCGGCCT GGTGGATCGA AGCCGGTGCT 
GCCCTTGTCA TTGCAACGGC ATCGGTGCGG GCATTGGGGA GTTTCTTACT GGCGATGGCT
ACAGACCGAA GTTTGGCGGT ACCAAAAGAG GAAATTCGAC TATCGTTAGG TCGATCGCTG
GCGCTGGCTT TAGAATTGGA ATTAGGAGCC GATATTCTAA AAACGGCCGT CGCCCCTACC
TGGAATGACA TTGGCCTGTT AGCGGCCATT GCTGTATTGA GAACAGCCCT TAATTACTTT
CTGGAACGTG AACTACGTAA TGCCGAACAA CGGGATAACG TACGACAACA ACCAGCGTCT
TCTCCTCTGG ACAACTAA
 
Protein sequence
MEEFIKAATL LSAWWIEAGA ALVIATASVR ALGSFLLAMA TDRSLAVPKE EIRLSLGRSL 
ALALELELGA DILKTAVAPT WNDIGLLAAI AVLRTALNYF LERELRNAEQ RDNVRQQPAS
SPLDN