Gene Slin_4200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4200 
Symbol 
ID8727959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5059339 
End bp5060496 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content54% 
IMG OID 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003388984 
Protein GI284039054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAG CCGTATTCCA CAAAATTGGC GACATTCAGG TCGACACCGT CGACGATCCG 
CGCATCGAAC AGTCGCGGGA TGCCATTATC CGGGTCACGT CGACGGCCAT CTGCGGGTCT
GACCTGCACA TCTACGACGG GTTTATTCCC CAGCTCAAAA ATGAAGTTCT TGGTCATGAA
TTCATGGGCA TCGTTGAAGA TGTGGGGTCT GAGGTGACCA ACCTCAAAAA AGGCGACCGG
GTCGTGGTGC CGTTTACAGT TGCCTGCGGC AAGTGCTATT TCTGCCAGAA GAATCTGCAA
ATGCACTGCG AAAACTCAAA CCCCGAGCAT TACGGCCCCG ATGGCGGCTT ACTCACCGAA
AAAGGGGGCG GCCTGTTCGG TTATACCGAT CTCTATGGCG GCTACAACGG CGGGCAAGCC
GAATACGTCC GGGTGCCTTA TGCCGATTAT GGCCTTCATA CCGTACCCGA ATCGCTCAAA
GACGAGCAGG TTCTGTTCCT GACCGATATT TTCCCGACCG GCTGGAGTTC CATTGAATGG
GGCGAACTGA AAGGTGGCGA AACCGTCGCT ATTTTCGGGT CGGGGCCGGT GGGGCTGATG
GCGCAGAAGT CAGCCTGGAT ACAGGGTGCC GCCCGCGTCA TTGCGATTGA CCCGGTAAAC
TATCGTCTGG AGAAGGCCCG GCGCGTCAAC AACGTGGAAA CACTCAACCC CGATGAGGTC
GACGTTATTG AAGCTATTCG CCAGATGACC AACGGGCGCG GAGCTGACCT TTGTGTGGAT
GCCGTGGGTA TGGAAGCAGA CCGGTCGCTG CTGGAAAAAG CCAAAGCCGT TATCAACTTC
GAGAAAGGAA CACCCAAAGT ACTGGAACTG TGTTTTCAGG CTGTTCGTCG GGGTGGTATC
GTATCGGTGG TTGGGGTATA TGGAACACCT TTCGACAATA TTTCCATTGG CCGCATGTTC
GACAAAGGCA TCACGGTTCG CTTCGGGCAG TCGTTCGTTC ACAAGAACAT GAACCACCTG
CTGGATCTGG TCGTGCAGGG TAAAGTGGTT CTCGACGACA TCATCTCGCA CACGCTCCCG
CTGGCCGATG CCTCAAAAGC CTACGATATG TTTAAGAAGA AACAGGACGA TTGTACCAAA
GTTGTGTTGA AGCCTTGA
 
Protein sequence
MKAAVFHKIG DIQVDTVDDP RIEQSRDAII RVTSTAICGS DLHIYDGFIP QLKNEVLGHE 
FMGIVEDVGS EVTNLKKGDR VVVPFTVACG KCYFCQKNLQ MHCENSNPEH YGPDGGLLTE
KGGGLFGYTD LYGGYNGGQA EYVRVPYADY GLHTVPESLK DEQVLFLTDI FPTGWSSIEW
GELKGGETVA IFGSGPVGLM AQKSAWIQGA ARVIAIDPVN YRLEKARRVN NVETLNPDEV
DVIEAIRQMT NGRGADLCVD AVGMEADRSL LEKAKAVINF EKGTPKVLEL CFQAVRRGGI
VSVVGVYGTP FDNISIGRMF DKGITVRFGQ SFVHKNMNHL LDLVVQGKVV LDDIISHTLP
LADASKAYDM FKKKQDDCTK VVLKP