| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4196 |
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| Symbol | |
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| ID | 8727955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5051670 |
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| End bp | 5054678 |
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| Gene Length | 3009 bp |
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| Protein Length | 1002 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003388980 |
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| Protein GI | 284039050 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.690171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTCT GTCGGTCTGC TTTTTTTAGT TTAGTTAGCG TTTTTCTGTC CGTAACGACC
TTTGCGCAAA CCACATCGCC CTCCTTTCTT AAACTCAATG CCCGCCAGGC TTGCTGGGCC
GATTCGGTGT TTACGAACAT GGCCCCCGAC GACCGGATTG CCCAGCTAAT TATGGTAGCC
GGGTACTCGA ACCGGAAACC GGCCTACGAA GATTCGCTGA TACGGCTTGT TCAGACCAAT
AAACTCGGTG GGGTCGTCAT GTTTCAGGGT GGGCCCGTTC GGCAGGCGCA GCTTACCAAT
CGGTTACAGG CCGGTTCGCC CGTTCCACTC CTCATTGCGA TGGATGCCGA ATGGGGCATT
GCCATGCGCC TGGACAGCAC CGTTCGCTAC CCCTACCAGA TGACCCTCGG CGCCATGCAG
GGGGCCGCTT CCGATTCGCT CATTTACCAG ATGGGCGCCA ACCTGGCTAA ACAGGCCCGT
AGGCTGGGGA TGCATGTGAA CTTTGCCCCT TCGGTCGATG TCAACAACAA CCCGAACAAC
CCCGTCATCA ACTTCCGCTC CTTTGGCGAA GACAAATATG CCGTTGCCCG CAAAGCCCTT
GCTTACATGC GCGGTATGCA GGACAACCAG TTACTAACCA GCATCAAGCA CTTTCCCGGC
CACGGCGACA CTGGCACCGA CTCCCATTAC GACTTACCCC TGATTGCCAA AAGCCGGACC
CAGCTCGACT CGCTCGAACT GTATCCGTTC CGGGAGTTGA TCCGGGCGGG GGCTACGGGC
GTGATGATCG CGCACCTCAA CATTCCCGCT CTCGATACCA CCCGAAATCG CCCATCGACG
CTTTCGCCCG CTATTGTTAC GAACCTCCTC AAGAATGAAT TAGGCTTTAA AGGGCTGGTC
TTTTCAGATG CGATGAATAT GAAAGCCGTA ACCAAATTCT ACCCGTCCGG CAAAGCCGAT
GAACTGGGCC TGGAAGCGGG GATGGACGTG CTCGAATTTA CCGAAGATGT TCCGGCGGCA
CTGGCGCAGG TGAAACAGGC CATTGTGGAC GGACGAATCA CGCAGGCCTC CATCGACGCC
CGCTGCCTGA AAGTATTACA GGCCAAAGCG TGGGCCGGGC TGGATATGTA CAAACCCATT
GTAATGGAGA ACCTGGTCGA AGACCTGAAC CCGGTTCAGG ACGAGCTACT TAACCGCAAG
CTTACCGAAC GCAGCCTGAC GGTTTTGAAG AACGACCGGA ATGTGCTGCC GCTACAGGGT
CTGGATACAC TCCGGATTGC GTCGGTAGCG GTGGAGAGCG ACAAGATCAC GGCGTTTCAG
CAGATGGCGT CCAACTACAC CAAAATCGAC CATTTCAACG TAACCTCGAA AACAGCTGAT
TCGACCTGGG CGCAAATCCG TGATTCGCTC AGCAACTACA ACCTTATTCT GGTCGATGTC
CACCTGAACA ATATCCGCCC CGCCGTTAAA TACGGTCTGC AACCCAAAAC GGCGGGCATC
GTTGGCGAAC TGGTGGCTAC CGGCAAAGCG GTCGTTACGG TGTTCGGCAA TGTGTATGCG
CTGGACAAAC TGACCTTTCC GATGGATACC GCTCAGCCCA GCCGCAACAT CGAACAGGCG
CGGGCCATTG TGATGCCGTA CCAGCTGACA CCCTACACGG AAGAACTGTC GGCTCAGTTG
ATTTTCGGGG CTATTGGCGC ATCGGGTAAG CTGCCCGTTA CGGTCAACCA GCGATTCCGG
CTGGGCGACG GGTTGCCCGT TCAAGCCATT GGTCGGATGA AATATACCAT TCCGGAAGAG
GTGGGTATCA GCAGTAAGTT TCTGACCCAA CAGGTCGACT CGCTGGTAAA CGTGGGCATC
AGCCAGGGCG CTTTTCCGGG CTGTGTGGTC CAGATGGCGA AAGATGGTAA GGTAATTTTC
CGAAAAGCCT ATGGCAAGCA TACCTACGAT GCTTCGCTGG GGGCCGAACC CCTTCCGGTG
CAGCTCGACG ACCTGTATGA CATGGCCTCG GTCACGAAGG TGAGTACCTC CACCCCCGCC
CTCATGCACC TGGTCGACGA CGGCAAGTTC AACCTGAACG GTAAAATGGC CGATTATCTG
CCCGGTTTCA AGAAGTCGAA CAAAGCCGAT CTGCTCTGGC GTGATGTACT GACCCACCAG
GCCCGGCTAA GAGCCTGGAT ACCTTTCTGG ATGGACACCA AAAACCCGGA CGGCTCGTGG
AAGCCCAAAA CCTTCCAGAA GGAACGGTCT GGCCGGTACC CGATTGAAGT GACCGACAGC
CTGTTTGAGT TCAAAAACTA CCCGAAAACG ATTTTTGAGC AGATCAGAGA CTCCCCGCTG
AACGCGAAAA AAGAATATGT GTACTCTGAC CTGTCGTTTA TTCTATACCC CCAGATCGTG
AAACGACTAA CGGGCGAAAA CTTCGAAGAC TACCTCAAAA AGACCTTCTA CAAGCCCCTT
GGCGCGAGTA CGCTTACCTT CCTGCCCCGC CGGTTCTATC CGCTCACCCG GATCGTTCCT
ACCGAGTACG ATTCGCTGTT CCGCAAAACG CTCATCTGGG GGCGTGTGCA CGACGAGGGC
GCGGCTATGT TGGGTGGCCT ATCGGGACAT GCGGGCCTGT TTGGTAATGC GAATGACTTG
ATGAAGGTTT ACGAAATGTA CCGCCAGAAA GGCAGTTACG GCGGTCAGCG GTTTATTTCA
GAAAAGACAA TTGCCGAGTT TACCCGGTAT CAGTTTCCGG AGCTGGGCAA CCGGCGTGGT
CTTGGCTTCG ACAAACCGTC GTTCGCCTAT ACGGGCAATG CGCCGAAGTC GGCTACCAAA
GCCAGTTACG GGCACTCAGG CTATACAGGC ACGTTTGTGT GGGTAGAACC CGACCCAGCC
TATAATTTAA CATACATATT TTTGTGCAAC CGCGTATATC CTACGAGAAA TAATCCTAAA
CTTGGTAATC TAAACACCCG CACCAACATT GTCGAAGCAT TGTATCAGGC AACCAAACGT
GGACTGTGA
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| Protein sequence | MPFCRSAFFS LVSVFLSVTT FAQTTSPSFL KLNARQACWA DSVFTNMAPD DRIAQLIMVA
GYSNRKPAYE DSLIRLVQTN KLGGVVMFQG GPVRQAQLTN RLQAGSPVPL LIAMDAEWGI
AMRLDSTVRY PYQMTLGAMQ GAASDSLIYQ MGANLAKQAR RLGMHVNFAP SVDVNNNPNN
PVINFRSFGE DKYAVARKAL AYMRGMQDNQ LLTSIKHFPG HGDTGTDSHY DLPLIAKSRT
QLDSLELYPF RELIRAGATG VMIAHLNIPA LDTTRNRPST LSPAIVTNLL KNELGFKGLV
FSDAMNMKAV TKFYPSGKAD ELGLEAGMDV LEFTEDVPAA LAQVKQAIVD GRITQASIDA
RCLKVLQAKA WAGLDMYKPI VMENLVEDLN PVQDELLNRK LTERSLTVLK NDRNVLPLQG
LDTLRIASVA VESDKITAFQ QMASNYTKID HFNVTSKTAD STWAQIRDSL SNYNLILVDV
HLNNIRPAVK YGLQPKTAGI VGELVATGKA VVTVFGNVYA LDKLTFPMDT AQPSRNIEQA
RAIVMPYQLT PYTEELSAQL IFGAIGASGK LPVTVNQRFR LGDGLPVQAI GRMKYTIPEE
VGISSKFLTQ QVDSLVNVGI SQGAFPGCVV QMAKDGKVIF RKAYGKHTYD ASLGAEPLPV
QLDDLYDMAS VTKVSTSTPA LMHLVDDGKF NLNGKMADYL PGFKKSNKAD LLWRDVLTHQ
ARLRAWIPFW MDTKNPDGSW KPKTFQKERS GRYPIEVTDS LFEFKNYPKT IFEQIRDSPL
NAKKEYVYSD LSFILYPQIV KRLTGENFED YLKKTFYKPL GASTLTFLPR RFYPLTRIVP
TEYDSLFRKT LIWGRVHDEG AAMLGGLSGH AGLFGNANDL MKVYEMYRQK GSYGGQRFIS
EKTIAEFTRY QFPELGNRRG LGFDKPSFAY TGNAPKSATK ASYGHSGYTG TFVWVEPDPA
YNLTYIFLCN RVYPTRNNPK LGNLNTRTNI VEALYQATKR GL
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